RNA–Protein interactions for RNA: ENST00000528099.5

C11orf54-206, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C11orf54, Length 1,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-206ENST00000528099 PCMTD1Q96MG8 357 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-206ENST00000528099 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.01
C11orf54-206ENST00000528099 MEGF6O75095 1541 aa8.71□□□□□ -1.02
C11orf54-206ENST00000528099 MAP2P11137 1827 aaKnown RBP8.71□□□□□ -1.02
C11orf54-206ENST00000528099 TIMP2P16035 220 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 FSHRP23945 695 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 CHRNA5P30532 468 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 SH3BP5LQ7L8J4 393 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 SH3RF1Q7Z6J0 888 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 ANKRD24Q8TF21 1146 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 TAF1DQ9H5J8 278 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-206ENST00000528099 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 NFKBIEO00221 500 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 GRM5P41594 1212 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
C11orf54-206ENST00000528099 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-206ENST00000528099 DDNO94850 711 aaPredicted RBP8.69□□□□□ -1.02
C11orf54-206ENST00000528099 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
C11orf54-206ENST00000528099 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
C11orf54-206ENST00000528099 ITPKCQ96DU7 683 aa8.69□□□□□ -1.02
C11orf54-206ENST00000528099 PUS7Q96PZ0 661 aaKnown RBP8.69□□□□□ -1.02
C11orf54-206ENST00000528099 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
C11orf54-206ENST00000528099 TTC21AQ8NDW8 1320 aa8.69□□□□□ -1.02
C11orf54-206ENST00000528099 NR3C2P08235 984 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-206ENST00000528099 PDXDC2PQ6P474 469 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 CNTROBQ8N137 903 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 FAM208AQ9UK61 1670 aaKnown RBP8.68□□□□□ -1.02
C11orf54-206ENST00000528099 AOC2O75106 756 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 GYS1P13807 737 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 NEUROD1Q13562 356 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 PNMA1Q8ND90 353 aa8.68□□□□□ -1.02
C11orf54-206ENST00000528099 LTN1O94822 1766 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 UPP2O95045 317 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 RFC5P40937 340 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 GRM1Q13255 1194 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
C11orf54-206ENST00000528099 DDX21Q9NR30 783 aaKnown RBP eCLIP8.67□□□□□ -1.02
C11orf54-206ENST00000528099 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 USP17L8P0C7I0 530 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 PTK2Q05397 1052 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 C1QTNF2Q9BXJ5 285 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
C11orf54-206ENST00000528099 EAPPQ56P03 285 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-206ENST00000528099 EPS8L1Q8TE68 723 aa8.66□□□□□ -1.02
C11orf54-206ENST00000528099 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-206ENST00000528099 ITGB4P16144 1822 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 LOC102724428A0A0B4J2F2 783 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 SIK1P57059 783 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
C11orf54-206ENST00000528099 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
C11orf54-206ENST00000528099 CARD11Q9BXL7 1154 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
C11orf54-206ENST00000528099 TRPM7Q96QT4 1865 aa8.65□□□□□ -1.03
C11orf54-206ENST00000528099 TONSLQ96HA7 1378 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 BMP2P12643 396 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
C11orf54-206ENST00000528099 CCDC116Q8IYX3 515 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 RTCBQ9Y3I0 505 aaKnown RBP8.64□□□□□ -1.03
C11orf54-206ENST00000528099 FER1L6Q2WGJ9 1857 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 MON2Q7Z3U7 1717 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
C11orf54-206ENST00000528099 ITPK1Q13572 414 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-206ENST00000528099 EMILIN1Q9Y6C2 1016 aa8.64□□□□□ -1.03
C11orf54-206ENST00000528099 COL6A3P12111 3177 aa8.63□□□□□ -1.03
C11orf54-206ENST00000528099 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
C11orf54-206ENST00000528099 CTU1Q7Z7A3 348 aaKnown RBP8.63□□□□□ -1.03
C11orf54-206ENST00000528099 PNMA8AQ86V59 439 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-206ENST00000528099 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
C11orf54-206ENST00000528099 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
C11orf54-206ENST00000528099 LTBP3Q9NS15 1303 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 EPHX2P34913 555 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 DDR1Q08345 913 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 CIAPIN1Q6FI81 312 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 HHIPL1Q96JK4 782 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 KCTD15Q96SI1 283 aaPredicted RBP8.62□□□□□ -1.03
C11orf54-206ENST00000528099 HACL1Q9UJ83 578 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
C11orf54-206ENST00000528099 INSRP06213 1382 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 CST9Q5W186 159 aa8.62□□□□□ -1.03
C11orf54-206ENST00000528099 CDV3Q9UKY7 258 aaKnown RBP8.62□□□□□ -1.03
C11orf54-206ENST00000528099 SMG6Q86US8 1419 aaKnown RBP8.62□□□□□ -1.03
C11orf54-206ENST00000528099 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
C11orf54-206ENST00000528099 MAN1A2O60476 641 aa8.61□□□□□ -1.03
C11orf54-206ENST00000528099 RFC4P35249 363 aa8.61□□□□□ -1.03
C11orf54-206ENST00000528099 TRIM26Q12899 539 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms