RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 SNED1Q8TER0 1413 aa13.54□□□□□ -0.24
PSMC3-204ENST00000527906 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 SIRT2Q8IXJ6 389 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
PSMC3-204ENST00000527906 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
PSMC3-204ENST00000527906 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
PSMC3-204ENST00000527906 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
PSMC3-204ENST00000527906 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
PSMC3-204ENST00000527906 HOXA10P31260 410 aaPredicted RBP13.51□□□□□ -0.25
PSMC3-204ENST00000527906 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
PSMC3-204ENST00000527906 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
PSMC3-204ENST00000527906 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
PSMC3-204ENST00000527906 CTU1Q7Z7A3 348 aaKnown RBP13.51□□□□□ -0.25
PSMC3-204ENST00000527906 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
PSMC3-204ENST00000527906 COPRSQ9NQ92 184 aa13.51□□□□□ -0.25
PSMC3-204ENST00000527906 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
PSMC3-204ENST00000527906 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
PSMC3-204ENST00000527906 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 HUNKP57058 714 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
PSMC3-204ENST00000527906 GREM2Q9H772 168 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
PSMC3-204ENST00000527906 CIAO1O76071 339 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 ITGA6P23229 1130 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
PSMC3-204ENST00000527906 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
PSMC3-204ENST00000527906 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 RNF186Q9NXI6 227 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 CHMP3Q9Y3E7 222 aa13.49□□□□□ -0.25
PSMC3-204ENST00000527906 TRPA1O75762 1119 aa13.48□□□□□ -0.25
PSMC3-204ENST00000527906 PTPN12Q05209 780 aaKnown RBP13.48□□□□□ -0.25
PSMC3-204ENST00000527906 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
PSMC3-204ENST00000527906 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
PSMC3-204ENST00000527906 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
PSMC3-204ENST00000527906 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
PSMC3-204ENST00000527906 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
PSMC3-204ENST00000527906 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
PSMC3-204ENST00000527906 CDC37L1Q7L3B6 337 aa13.47□□□□□ -0.25
PSMC3-204ENST00000527906 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
PSMC3-204ENST00000527906 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
PSMC3-204ENST00000527906 EYA2O00167 538 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 IGHDP01880 384 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 IGHMBP2P38935 993 aaKnown RBP13.46□□□□□ -0.25
PSMC3-204ENST00000527906 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
PSMC3-204ENST00000527906 GRAPQ13588 217 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 RGMBQ6NW40 437 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
PSMC3-204ENST00000527906 ZC3H15Q8WU90 426 aaKnown RBP13.46□□□□□ -0.25
PSMC3-204ENST00000527906 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
PSMC3-204ENST00000527906 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
PSMC3-204ENST00000527906 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
PSMC3-204ENST00000527906 BBOX1O75936 387 aa13.45□□□□□ -0.26
PSMC3-204ENST00000527906 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
PSMC3-204ENST00000527906 HIRAP54198 1017 aaPredicted RBP13.45□□□□□ -0.26
PSMC3-204ENST00000527906 RPS8P62241 208 aaKnown RBP13.45□□□□□ -0.26
PSMC3-204ENST00000527906 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
PSMC3-204ENST00000527906 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
PSMC3-204ENST00000527906 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
PSMC3-204ENST00000527906 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 CXCL9Q07325 125 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■■□ 24.8
PSMC3-204ENST00000527906 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 TRPM4Q8TD43 1214 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 KIF1BPQ96EK5 621 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
PSMC3-204ENST00000527906 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 COL4A1P02462 1669 aa13.44□□□□□ -0.26
PSMC3-204ENST00000527906 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 MROH5Q6ZUA9 1318 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 FXR1P51114 621 aaKnown RBP eCLIP13.43□□□□□ -0.26
PSMC3-204ENST00000527906 PKN2Q16513 984 aaKnown RBP13.43□□□□□ -0.26
PSMC3-204ENST00000527906 AOC3Q16853 763 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 DLK2Q6UY11 383 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 USP48Q86UV5 1035 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 CELF1Q92879 486 aaKnown RBP13.43□□□□□ -0.26
PSMC3-204ENST00000527906 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
PSMC3-204ENST00000527906 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
PSMC3-204ENST00000527906 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
PSMC3-204ENST00000527906 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
PSMC3-204ENST00000527906 NUCB1Q02818 461 aa13.42□□□□□ -0.26
PSMC3-204ENST00000527906 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
PSMC3-204ENST00000527906 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms