RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GJD3Q8N144 294 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 LENG1Q96BZ8 264 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 C9orf172C9J069 976 aa8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 EREGO14944 169 aa8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 FURINP09958 794 aa8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 EHHADHQ08426 723 aa8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
HMGB1P1-201ENST00000522557 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 NFKBIEO00221 500 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 PHACTR2O75167 634 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 CDC25BP30305 580 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 RANGAP1P46060 587 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 SH2B1Q9NRF2 756 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
HMGB1P1-201ENST00000522557 LINC01387J3KSC0 135 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 ERCC3P19447 782 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 MBTPS1Q14703 1052 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 SUZ12Q15022 739 aaKnown RBP8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 SETDB1Q15047 1291 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 DZANK1Q9NVP4 752 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 USP21Q9UK80 565 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
HMGB1P1-201ENST00000522557 DLL1O00548 723 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 CDC27P30260 824 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 NPAS4Q8IUM7 802 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 CACTIN-AS1Q8N1I8 211 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 ZFYVE28Q9HCC9 887 aa8.08□□□□□ -1.12
HMGB1P1-201ENST00000522557 POLR3DP05423 398 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P1-201ENST00000522557 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
HMGB1P1-201ENST00000522557 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
HMGB1P1-201ENST00000522557 UNCXA6NJT0 531 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 GALNT11Q8NCW6 608 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 OSMRQ99650 979 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 ADAM19Q9H013 955 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 LATS2Q9NRM7 1088 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 IGSF5Q9NSI5 407 aa8.06□□□□□ -1.12
HMGB1P1-201ENST00000522557 PDE2AO00408 941 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 NDUFB5O43674 189 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 ADAM23O75077 832 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 PTPRAP18433 802 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 EPHA1P21709 976 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 WFDC12Q8WWY7 111 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 NXPE3Q969Y0 559 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 ZKSCAN3Q9BRR0 538 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 MUC3BQ9H195 1237 aa8.05□□□□□ -1.12
HMGB1P1-201ENST00000522557 IREB2P48200 963 aaKnown RBP8.04□□□□□ -1.12
HMGB1P1-201ENST00000522557 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P1-201ENST00000522557 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
HMGB1P1-201ENST00000522557 CARD10Q9BWT7 1032 aa8.04□□□□□ -1.12
HMGB1P1-201ENST00000522557 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 TM4SF5O14894 197 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 ALX3O95076 343 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 IGHA2P01877 340 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 EDN3P14138 238 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 NOS3P29474 1203 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 FAM129BQ96TA1 746 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 KCNK4Q9NYG8 393 aa8.03□□□□□ -1.12
HMGB1P1-201ENST00000522557 FSCN2O14926 492 aa8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 ORC1Q13415 861 aa8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 RSPO4Q2I0M5 234 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 TMC1Q8TDI8 760 aa8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 ASB16Q96NS5 453 aa8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 NIF3L1Q9GZT8 377 aa8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P1-201ENST00000522557 GPR182O15218 404 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 DDX3YO15523 660 aaKnown RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 CD68P34810 354 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 PDE3BQ13370 1112 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 NKAPLQ5M9Q1 402 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 HGSNATQ68CP4 663 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 KLHDC7BQ96G42 594 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 CITED4Q96RK1 184 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 SEMA6BQ9H3T3 888 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 SOX13Q9UN79 622 aa8.01□□□□□ -1.13
HMGB1P1-201ENST00000522557 FAM177BA6PVY3 158 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 ITGB7P26010 798 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 FAM117BQ6P1L5 589 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 AGGF1Q8N302 714 aaeCLIP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms