RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 GJA3Q9Y6H8 435 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 PDE6BP35913 854 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 IMPG2Q9BZV3 1241 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 CASQ1P31415 396 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 SPAG1Q07617 926 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 MAP3K9P80192 1104 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 TFCP2Q12800 502 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 NMIQ13287 307 aaPredicted RBP18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 CERS3Q8IU89 383 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 USP21Q9UK80 565 aa18.55■□□□□ 0.56
PCDHA3-201ENST00000522353 H0YIN7 160 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 ACTN2P35609 894 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 Q6ZUG5 572 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 SPAG5Q96R06 1193 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 IGHDP01880 384 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 EIF6P56537 245 aaKnown RBP18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 TEX11Q8IYF3 940 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 URI1O94763 535 aaPredicted RBP18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 HIBADHP31937 336 aaKnown RBP18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 ZNF165P49910 485 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 NAA15Q9BXJ9 866 aaKnown RBP18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 N4BP3O15049 544 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
PCDHA3-201ENST00000522353 RAD50Q92878 1312 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 PDE8AO60658 829 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 FAM89AQ96GI7 184 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 EYA2O00167 538 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 IFI16Q16666 785 aaKnown RBP18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 GTPBP4Q9BZE4 634 aaKnown RBP18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 CA8P35219 290 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 NOP2P46087 812 aaKnown RBP18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 TBC1D32Q96NH3 1257 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 PLVAPQ9BX97 442 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 GDPD2Q9HCC8 539 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
PCDHA3-201ENST00000522353 PSMA7O14818 248 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 TESK2Q96S53 571 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 SYNCQ9H7C4 482 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 PARD3Q8TEW0 1356 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 NAP1L4Q99733 375 aaKnown RBP18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 GOLGA6L9A6NEM1 432 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 DNA2P51530 1060 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 RRAGBQ5VZM2 374 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 METTL22Q9BUU2 404 aaPredicted RBP18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
PCDHA3-201ENST00000522353 KIF4AO95239 1232 aa18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 CEP85Q6P2H3 762 aa18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 DYDC1Q8WWB3 177 aa18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 BICC1Q9H694 974 aaKnown RBP18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 USP25Q9UHP3 1055 aa18.52■□□□□ 0.55
PCDHA3-201ENST00000522353 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 ITGA6P23229 1130 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 LARGE2Q8N3Y3 721 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 ASIC1P78348 528 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 AKR1B10O60218 316 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 TNNT1P13805 278 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 TSPYL6Q8N831 410 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
PCDHA3-201ENST00000522353 IFFO1Q0D2I5 559 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 COMMD10Q9Y6G5 202 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 MRPS27Q92552 414 aaKnown RBP18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 BIN2Q9UBW5 565 aaPredicted RBP18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 LRRC45Q96CN5 670 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 SLC52A2Q9HAB3 445 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 CCDC171Q6TFL3 1326 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
PCDHA3-201ENST00000522353 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 AFMP43652 599 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 BRDTQ58F21 947 aaPredicted RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 CCDC113Q9H0I3 377 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms