RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 DSC3Q14574 896 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 CEP135Q66GS9 1140 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 FBXO11Q86XK2 927 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 IL22RA1Q8N6P7 574 aa7.89□□□□□ -1.15
PTPN12-215ENST00000522115 POP1Q99575 1024 aaKnown RBP7.89□□□□□ -1.15
PTPN12-215ENST00000522115 BHLHE41Q9C0J9 482 aaPredicted RBP7.89□□□□□ -1.15
PTPN12-215ENST00000522115 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-215ENST00000522115 MAPK1P28482 360 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 ORC1Q13415 861 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 GDF6Q6KF10 455 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-215ENST00000522115 TMC1Q8TDI8 760 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 DCAF11Q8TEB1 546 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 NACC1Q96RE7 527 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 OSMRQ99650 979 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 ZKSCAN3Q9BRR0 538 aa7.88□□□□□ -1.15
PTPN12-215ENST00000522115 EIF1AYO14602 144 aaKnown RBP7.87□□□□□ -1.15
PTPN12-215ENST00000522115 DEAF1O75398 565 aaPredicted RBP7.87□□□□□ -1.15
PTPN12-215ENST00000522115 ACPPP15309 386 aa7.87□□□□□ -1.15
PTPN12-215ENST00000522115 CDC27P30260 824 aa7.87□□□□□ -1.15
PTPN12-215ENST00000522115 ZSCAN29Q8IWY8 852 aaPredicted RBP7.87□□□□□ -1.15
PTPN12-215ENST00000522115 NXPE3Q969Y0 559 aa7.87□□□□□ -1.15
PTPN12-215ENST00000522115 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
PTPN12-215ENST00000522115 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
PTPN12-215ENST00000522115 KIAA0319Q5VV43 1072 aa7.86□□□□□ -1.15
PTPN12-215ENST00000522115 ADAMTSL4Q6UY14 1074 aa7.86□□□□□ -1.15
PTPN12-215ENST00000522115 CD163Q86VB7 1156 aa7.86□□□□□ -1.15
PTPN12-215ENST00000522115 WNT8BQ93098 351 aa7.86□□□□□ -1.15
PTPN12-215ENST00000522115 LENG1Q96BZ8 264 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-215ENST00000522115 CSRNP1Q96S65 589 aa7.86□□□□□ -1.15
PTPN12-215ENST00000522115 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 DLL1O00548 723 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 USPL1Q5W0Q7 1092 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 HHIPQ96QV1 700 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 LATS2Q9NRM7 1088 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
PTPN12-215ENST00000522115 A0A1W2PP55 124 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 C1QTNF9BB2RNN3 333 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 C9orf172C9J069 976 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 TM4SF5O14894 197 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 APBA3O96018 575 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 POLR3DP05423 398 aaPredicted RBP7.84□□□□□ -1.15
PTPN12-215ENST00000522115 SELPP16109 830 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 CHRNA4P43681 627 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 FMR1Q06787 632 aaKnown RBP eCLIP7.84□□□□□ -1.15
PTPN12-215ENST00000522115 SETDB1Q15047 1291 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 CCNJLQ8IV13 435 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 BSNDQ8WZ55 320 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 CCDC74AQ96AQ1 378 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 LACRTQ9GZZ8 138 aa7.84□□□□□ -1.15
PTPN12-215ENST00000522115 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 EPHA1P21709 976 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 PLCB3Q01970 1234 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 NRG1Q02297 640 aaPredicted RBP7.83□□□□□ -1.16
PTPN12-215ENST00000522115 GRIK4Q16099 956 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 ENOX2Q16206 610 aaKnown RBP7.83□□□□□ -1.16
PTPN12-215ENST00000522115 IGF2-ASQ6U949 168 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 TCF12Q99081 682 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
PTPN12-215ENST00000522115 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 H3BRJ5 948 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 TRPA1O75762 1119 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 PROCP04070 461 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 PIP4K2BP78356 416 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 COL19A1Q14993 1142 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 KLHL23Q8NBE8 558 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
PTPN12-215ENST00000522115 MSTNO14793 375 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 CABP4P57796 275 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 ADGRE1Q14246 886 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 GPAT2Q6NUI2 795 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
PTPN12-215ENST00000522115 FAM117BQ6P1L5 589 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 FBF1Q8TES7 1133 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 NPHS2Q9NP85 383 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 OSGEPQ9NPF4 335 aa7.81□□□□□ -1.16
PTPN12-215ENST00000522115 SH2B1Q9NRF2 756 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-215ENST00000522115 LINC01387J3KSC0 135 aa7.8□□□□□ -1.16
PTPN12-215ENST00000522115 FSCN2O14926 492 aa7.8□□□□□ -1.16
PTPN12-215ENST00000522115 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-215ENST00000522115 PTPN12Q05209 780 aaKnown RBP7.8□□□□□ -1.16
PTPN12-215ENST00000522115 MBTPS1Q14703 1052 aa7.8□□□□□ -1.16
PTPN12-215ENST00000522115 SOX17Q9H6I2 414 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-215ENST00000522115 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
PTPN12-215ENST00000522115 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
PTPN12-215ENST00000522115 TMEM130Q8N3G9 435 aa7.79□□□□□ -1.16
PTPN12-215ENST00000522115 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
PTPN12-215ENST00000522115 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
PTPN12-215ENST00000522115 SEC31BQ9NQW1 1179 aa7.79□□□□□ -1.16
PTPN12-215ENST00000522115 TRAK1Q9UPV9 953 aa7.79□□□□□ -1.16
PTPN12-215ENST00000522115 PNMA6FA0A0J9YX94 578 aa7.78□□□□□ -1.16
PTPN12-215ENST00000522115 ITPKAP23677 461 aa7.78□□□□□ -1.16
PTPN12-215ENST00000522115 SHISA2Q6UWI4 295 aa7.78□□□□□ -1.16
PTPN12-215ENST00000522115 DNAJC14Q6Y2X3 702 aaPredicted RBP7.78□□□□□ -1.16
PTPN12-215ENST00000522115 TXNRD3Q86VQ6 643 aa7.78□□□□□ -1.16
PTPN12-215ENST00000522115 A0A096LPE4 126 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 552.8 ms