RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 LTN1O94822 1766 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 NR1I2O75469 434 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 HSPD1P10809 573 aaKnown RBP20.52■□□□□ 0.88
TRAM1-205ENST00000521425 PTPN21Q16825 1174 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 DNAJC25Q9H1X3 360 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 STARD3NLO95772 234 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 TRIM5Q9C035 493 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 IPO4Q8TEX9 1081 aaKnown RBP20.51■□□□□ 0.87
TRAM1-205ENST00000521425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.51■□□□□ 0.873e-7■■■□□ 15.8
TRAM1-205ENST00000521425 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
TRAM1-205ENST00000521425 IRS4O14654 1257 aaPredicted RBP20.51■□□□□ 0.87
TRAM1-205ENST00000521425 UTP14CQ5TAP6 766 aaKnown RBP20.51■□□□□ 0.87
TRAM1-205ENST00000521425 NOL7Q9UMY1 257 aaKnown RBP20.51■□□□□ 0.87
TRAM1-205ENST00000521425 NALCNQ8IZF0 1738 aa20.51■□□□□ 0.87
TRAM1-205ENST00000521425 CSPP1Q1MSJ5 1256 aa20.51■□□□□ 0.87
TRAM1-205ENST00000521425 ZNF592Q92610 1267 aa20.51■□□□□ 0.87
TRAM1-205ENST00000521425 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
TRAM1-205ENST00000521425 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
TRAM1-205ENST00000521425 EXOC5O00471 708 aa20.5■□□□□ 0.87
TRAM1-205ENST00000521425 IL15P40933 162 aaPredicted RBP20.5■□□□□ 0.87
TRAM1-205ENST00000521425 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
TRAM1-205ENST00000521425 KLF18A0A0U1RQI7 1052 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 E7EWF7 191 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 MARCKSP29966 332 aaPredicted RBP20.49■□□□□ 0.87
TRAM1-205ENST00000521425 ANO6Q4KMQ2 910 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 ZNF609O15014 1411 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 MPHOSPH8Q99549 860 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 HAUS7Q99871 368 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 FMN2Q9NZ56 1722 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 MAST3O60307 1309 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 RGPD1P0DJD0 1748 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 DZIP3Q86Y13 1208 aaKnown RBP20.49■□□□□ 0.87
TRAM1-205ENST00000521425 PHKBQ93100 1093 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 SDF4Q9BRK5 362 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 TOPAZ1Q8N9V7 1692 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 NFAT5O94916 1531 aa20.49■□□□□ 0.87
TRAM1-205ENST00000521425 PHKA1P46020 1223 aa20.48■□□□□ 0.87
TRAM1-205ENST00000521425 TERF1P54274 439 aa20.48■□□□□ 0.87
TRAM1-205ENST00000521425 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
TRAM1-205ENST00000521425 FILIP1Q7Z7B0 1213 aa20.48■□□□□ 0.87
TRAM1-205ENST00000521425 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 FGAP02671 866 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 TCIRG1Q13488 830 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 ZRSR1Q15695 479 aaKnown RBP20.47■□□□□ 0.87
TRAM1-205ENST00000521425 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 A0A1B0GVL5 298 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 PDCP20941 246 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 ATP6V1AP38606 617 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 CLEC17AQ6ZS10 378 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 LRP10Q7Z4F1 713 aa20.47■□□□□ 0.87
TRAM1-205ENST00000521425 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.47■□□□□ 0.87
TRAM1-205ENST00000521425 H7C1W4 665 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 RNF113AO15541 343 aaKnown RBP20.46■□□□□ 0.87
TRAM1-205ENST00000521425 ANKRD1Q15327 319 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 SPECC1Q5M775 1068 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 B4E1Z4 1266 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 ATG3Q9NT62 314 aa20.46■□□□□ 0.87
TRAM1-205ENST00000521425 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-205ENST00000521425 ADD1P35611 737 aaKnown RBP20.45■□□□□ 0.86
TRAM1-205ENST00000521425 TRDNQ13061 729 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 NRBP1Q9UHY1 535 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 ZNF213O14771 459 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 GPAA1O43292 621 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 CTDSPL2Q05D32 466 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 DHX32Q7L7V1 743 aaKnown RBP20.45■□□□□ 0.86
TRAM1-205ENST00000521425 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 KCNQ2O43526 872 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 PRC1O43663 620 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 CREBRFQ8IUR6 639 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 ZBTB9Q96C00 473 aa20.45■□□□□ 0.86
TRAM1-205ENST00000521425 BECN2A8MW95 431 aa20.44■□□□□ 0.86
TRAM1-205ENST00000521425 U2AF2P26368 475 aaKnown RBP eCLIP20.44■□□□□ 0.868e-8■■■■■ 32.8
TRAM1-205ENST00000521425 LRMPQ12912 555 aa20.44■□□□□ 0.86
TRAM1-205ENST00000521425 USP28Q96RU2 1077 aa20.44■□□□□ 0.86
TRAM1-205ENST00000521425 GTPBP4Q9BZE4 634 aaKnown RBP20.44■□□□□ 0.86
TRAM1-205ENST00000521425 SENP2Q9HC62 589 aa20.44■□□□□ 0.86
TRAM1-205ENST00000521425 ANKRD18BA2A2Z9 1011 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 SMIM22K7EJ46 135 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 AP5Z1O43299 807 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 ZNF500O60304 480 aaPredicted RBP20.43■□□□□ 0.86
TRAM1-205ENST00000521425 PRDM1O75626 825 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 KIF20AO95235 890 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 IMMTQ16891 758 aaKnown RBP20.43■□□□□ 0.86
TRAM1-205ENST00000521425 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 LETM1O95202 739 aaPredicted RBP20.43■□□□□ 0.86
TRAM1-205ENST00000521425 CCAR1Q8IX12 1150 aaKnown RBP20.43■□□□□ 0.86
TRAM1-205ENST00000521425 AIDAQ96BJ3 306 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 ORC3Q9UBD5 711 aaPredicted RBP20.43■□□□□ 0.86
TRAM1-205ENST00000521425 PRKAB2O43741 272 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 TYRO3Q06418 890 aa20.43■□□□□ 0.86
TRAM1-205ENST00000521425 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms