RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 USP17L1Q7RTZ2 530 aa20.58■□□□□ 0.89
IGHV3-62-201ENST00000520057 ZNF804AQ7Z570 1209 aa20.58■□□□□ 0.89
IGHV3-62-201ENST00000520057 MICALL2Q8IY33 904 aa20.58■□□□□ 0.89
IGHV3-62-201ENST00000520057 KLHDC4Q8TBB5 520 aa20.58■□□□□ 0.89
IGHV3-62-201ENST00000520057 DPF2Q92785 391 aa20.58■□□□□ 0.89
IGHV3-62-201ENST00000520057 RCAN3Q9UKA8 241 aa20.57■□□□□ 0.88
IGHV3-62-201ENST00000520057 SNAP23O00161 211 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 VIL1P09327 827 aaKnown RBP20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 LRRC24Q50LG9 513 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 RSBN1LQ6PCB5 846 aaPredicted RBP20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 TXNRD3Q86VQ6 643 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 VPS37DQ86XT2 251 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 RIPOR2Q9Y4F9 1068 aa20.56■□□□□ 0.88
IGHV3-62-201ENST00000520057 KLRK1P26718 216 aa20.55■□□□□ 0.88
IGHV3-62-201ENST00000520057 RBM26Q5T8P6 1007 aaKnown RBP20.55■□□□□ 0.88
IGHV3-62-201ENST00000520057 AGBL3Q8NEM8 1001 aa20.55■□□□□ 0.88
IGHV3-62-201ENST00000520057 SIL1Q9H173 461 aa20.55■□□□□ 0.88
IGHV3-62-201ENST00000520057 EYA2O00167 538 aa20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 MAP1SQ66K74 1059 aaPredicted RBP20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 TTLL5Q6EMB2 1281 aa20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 CD209Q9NNX6 404 aa20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 SCN4AP35499 1836 aa20.54■□□□□ 0.88
IGHV3-62-201ENST00000520057 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 GTF2IP78347 998 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 CAVIN4Q5BKX8 364 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 STRIP1Q5VSL9 837 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 CNTROBQ8N137 903 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 OGFOD1Q8N543 542 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 MYO3BQ8WXR4 1341 aa20.53■□□□□ 0.88
IGHV3-62-201ENST00000520057 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.88
IGHV3-62-201ENST00000520057 PDE8BO95263 885 aa20.52■□□□□ 0.88
IGHV3-62-201ENST00000520057 PTPN12Q05209 780 aaKnown RBP20.52■□□□□ 0.88
IGHV3-62-201ENST00000520057 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.88
IGHV3-62-201ENST00000520057 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
IGHV3-62-201ENST00000520057 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 HIBADHP31937 336 aaKnown RBP20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 RFX5P48382 616 aaPredicted RBP20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 TBC1D10BQ4KMP7 808 aaPredicted RBP20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 SAMD7Q7Z3H4 446 aa20.51■□□□□ 0.87
IGHV3-62-201ENST00000520057 IL15P40933 162 aaPredicted RBP20.5■□□□□ 0.87
IGHV3-62-201ENST00000520057 PUM3Q15397 648 aaKnown RBP20.5■□□□□ 0.87
IGHV3-62-201ENST00000520057 TRPM4Q8TD43 1214 aa20.5■□□□□ 0.87
IGHV3-62-201ENST00000520057 PANK1Q8TE04 598 aa20.5■□□□□ 0.87
IGHV3-62-201ENST00000520057 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
IGHV3-62-201ENST00000520057 SHTN1A0MZ66 631 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 CIAO1O76071 339 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 SLC5A1P13866 664 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 GYG1P46976 350 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 KIF4BQ2VIQ3 1234 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 DACT2Q5SW24 774 aa20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 PA2G4Q9UQ80 394 aaKnown RBP20.49■□□□□ 0.87
IGHV3-62-201ENST00000520057 RLBP1P12271 317 aa20.48■□□□□ 0.87
IGHV3-62-201ENST00000520057 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
IGHV3-62-201ENST00000520057 IL1R1P14778 569 aa20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 G3BP1Q13283 466 aaKnown RBP eCLIP20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 LPIN2Q92539 896 aa20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 DCPSQ96C86 337 aaKnown RBP20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
IGHV3-62-201ENST00000520057 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 MTX1Q13505 466 aa20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 KIAA0825Q8IV33 1275 aa20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 JAG2Q9Y219 1238 aa20.46■□□□□ 0.87
IGHV3-62-201ENST00000520057 ZBTB7BO15156 539 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 SASH1O94885 1247 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 MMP14P50281 582 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 ZNF280AP59817 542 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 HTRA3P83110 453 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 ATP2B3Q16720 1220 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 ATG9AQ7Z3C6 839 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 VGLL2Q8N8G2 317 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 IRS2Q9Y4H2 1338 aa20.45■□□□□ 0.86
IGHV3-62-201ENST00000520057 TMEM88BA6NKF7 163 aa20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 GMLQ99445 158 aa20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 GNL3LQ9NVN8 582 aaKnown RBP20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
IGHV3-62-201ENST00000520057 SCARF1Q14162 830 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 SULF1Q8IWU6 871 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 TDRD7Q8NHU6 1098 aaKnown RBP20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 COG6Q9Y2V7 657 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
IGHV3-62-201ENST00000520057 PNMA6EA0A0J9YXQ4 647 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms