RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 OTUD7BQ6GQQ9 843 aa21.3■■□□□ 1
ARFGAP1-209ENST00000518794 PAXIP1Q6ZW49 1069 aaPredicted RBP21.3■■□□□ 1
ARFGAP1-209ENST00000518794 USP28Q96RU2 1077 aa21.3■■□□□ 1
ARFGAP1-209ENST00000518794 RBM43Q6ZSC3 357 aaKnown RBP21.29■■□□□ 1
ARFGAP1-209ENST00000518794 CCAR1Q8IX12 1150 aaKnown RBP21.29■■□□□ 1
ARFGAP1-209ENST00000518794 PUS3Q9BZE2 481 aaKnown RBP21.29■■□□□ 1
ARFGAP1-209ENST00000518794 A1BGP04217 495 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
ARFGAP1-209ENST00000518794 PLA2G4DQ86XP0 818 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 HAND2P61296 217 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 ZSCAN25Q6NSZ9 544 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 CLIP2Q9UDT6 1046 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 PFKFB2O60825 505 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 GTF2F1P35269 517 aaKnown RBP eCLIP21.28■■□□□ 13e-9■□□□□ 8.8
ARFGAP1-209ENST00000518794 TDRD7Q8NHU6 1098 aaKnown RBP21.28■■□□□ 1
ARFGAP1-209ENST00000518794 SMARCC2Q8TAQ2 1214 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 CACTINQ8WUQ7 758 aaKnown RBP21.28■■□□□ 1
ARFGAP1-209ENST00000518794 DCAF5Q96JK2 942 aa21.28■■□□□ 1
ARFGAP1-209ENST00000518794 E7EWF7 191 aa21.27■■□□□ 1
ARFGAP1-209ENST00000518794 HSPD1P10809 573 aaKnown RBP21.27■■□□□ 1
ARFGAP1-209ENST00000518794 U2AF2P26368 475 aaKnown RBP eCLIP21.27■■□□□ 14e-8■□□□□ 9.9
ARFGAP1-209ENST00000518794 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
ARFGAP1-209ENST00000518794 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■■□□□ 1
ARFGAP1-209ENST00000518794 ZNF771Q7L3S4 317 aaPredicted RBP21.27■□□□□ 0.99
ARFGAP1-209ENST00000518794 M0R2C6 588 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 FKBP4Q02790 459 aaKnown RBP eCLIP21.26■□□□□ 0.995e-6■□□□□ 8.8
ARFGAP1-209ENST00000518794 PDCL2Q8N4E4 241 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 TPM3P06753 285 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 GJB4Q9NTQ9 266 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 MAST3O60307 1309 aa21.26■□□□□ 0.99
ARFGAP1-209ENST00000518794 C1orf167Q5SNV9 1468 aa21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 CHAF1AQ13111 956 aaPredicted RBP21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 TAF3Q5VWG9 929 aa21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 ZSCAN16Q9H4T2 348 aaPredicted RBP21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
ARFGAP1-209ENST00000518794 IFIT1P09914 478 aaKnown RBP21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 KCNA4P22459 653 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 ME1P48163 572 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 NAA30Q147X3 362 aaPredicted RBP21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 SH3TC1Q8TE82 1336 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 IQCB1Q15051 598 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
ARFGAP1-209ENST00000518794 A0A1B0GUL7 405 aa21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 H7C1W4 665 aa21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 PDIA3P30101 505 aaKnown RBP21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 SNW1Q13573 536 aaKnown RBP21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 ZMYM1Q5SVZ6 1142 aa21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 OSBP2Q969R2 916 aa21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
ARFGAP1-209ENST00000518794 GOLGA6L19H0YKK7 550 aa21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 ADORA1P30542 326 aa21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 FSIP1Q8NA03 581 aa21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 ZNF592Q92610 1267 aa21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 CWC25Q9NXE8 425 aaPredicted RBP21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 RCOR1Q9UKL0 485 aa21.22■□□□□ 0.99
ARFGAP1-209ENST00000518794 USP27XA6NNY8 438 aa21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 PI16Q6UXB8 463 aa21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 FILIP1Q7Z7B0 1213 aa21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 HELLSQ9NRZ9 838 aa21.21■□□□□ 0.99
ARFGAP1-209ENST00000518794 A0A1B0GVL5 298 aa21.2■□□□□ 0.99
ARFGAP1-209ENST00000518794 TNNT1P13805 278 aa21.2■□□□□ 0.99
ARFGAP1-209ENST00000518794 WASHC4Q2M389 1173 aa21.2■□□□□ 0.99
ARFGAP1-209ENST00000518794 CCDC73Q6ZRK6 1079 aa21.2■□□□□ 0.99
ARFGAP1-209ENST00000518794 NAA16Q6N069 864 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 LLPHQ9BRT6 129 aaKnown RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 C19orf44Q9H6X5 657 aa21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 RNF113AO15541 343 aaKnown RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 IRX5P78411 483 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 SCARF1Q14162 830 aa21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 TPD52L1Q16890 204 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-209ENST00000518794 ARFGEF2Q9Y6D5 1785 aa21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 EYA2O00167 538 aa21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 KINO60870 393 aaKnown RBP21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 PALLDQ8WX93 1383 aa21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 LAMA4Q16363 1823 aa21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 BECN2A8MW95 431 aa21.19■□□□□ 0.98
ARFGAP1-209ENST00000518794 IL15P40933 162 aaPredicted RBP21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 STX1AQ16623 288 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 DHX40Q8IX18 779 aaKnown RBP21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 AOPEPQ8N6M6 819 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.18■□□□□ 0.988e-13■□□□□ 10
ARFGAP1-209ENST00000518794 DENND2AQ9ULE3 1009 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 PCDHA7Q9UN72 937 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 RFX7Q2KHR2 1363 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 CARMIL3Q8ND23 1372 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 FOXP2O15409 715 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 ENGASEQ8NFI3 743 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 CLIC4Q9Y696 253 aa21.18■□□□□ 0.98
ARFGAP1-209ENST00000518794 SALL1Q9NSC2 1324 aa21.17■□□□□ 0.98
ARFGAP1-209ENST00000518794 ATF3P18847 181 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 462 ms