RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZDHHC1Q8WTX9 485 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ARMC5Q96C12 935 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 CDK11AQ9UQ88 783 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 AK5Q9Y6K8 562 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ASXL1Q8IXJ9 1541 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 CLIP1P30622 1438 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 PREX2Q70Z35 1606 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 TNFRSF10AO00220 468 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZIC2O95409 532 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 EIF4BP23588 611 aaKnown RBP6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 FANCCQ00597 558 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 NBPF8Q3BBV2 869 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 C8orf34Q49A92 452 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF598Q86UK7 904 aaKnown RBP6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 RHPN1Q8TCX5 695 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 SRCIN1Q9C0H9 1055 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 KLK14Q9P0G3 267 aa6.95□□□□□ -1.3
HMGB1P23-201ENST00000518743 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 UPP2O95045 317 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 EPB42P16452 691 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 FOXC1Q12948 553 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF295-AS1Q8N0V1 137 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 DDX17Q92841 729 aaKnown RBP6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 NUDT16Q96DE0 195 aaKnown RBP6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 TSEN34Q9BSV6 310 aaKnown RBP6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 USP3Q9Y6I4 520 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 SYCP2Q9BX26 1530 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 MROH1Q8NDA8 1641 aa6.94□□□□□ -1.3
HMGB1P23-201ENST00000518743 PTCH1Q13635 1447 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 SLIT1O75093 1534 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 LCE2BO14633 110 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 KIF3BO15066 747 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 MICAL2O94851 1124 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 RNF144AP50876 292 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 LAPTM4AQ15012 233 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 GPR162Q16538 588 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 METTL16Q86W50 562 aaKnown RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 GPR152Q8TDT2 470 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 SNX29Q8TEQ0 813 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 FAM161BQ96MY7 647 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 TANGO6Q9C0B7 1094 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 NRKQ7Z2Y5 1582 aa6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 INO80Q9ULG1 1556 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P23-201ENST00000518743 GLI3P10071 1580 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 TTC24A2A3L6 582 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 ARSDP51689 593 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 RELBQ01201 579 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 CBLBQ13191 982 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 VPS37DQ86XT2 251 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 GRIP2Q9C0E4 1043 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 SHANK3Q9BYB0 1731 aa6.92□□□□□ -1.3
HMGB1P23-201ENST00000518743 GPATCH8Q9UKJ3 1502 aaKnown RBP6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 ATP2B1P20020 1258 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 HS2ST1Q7LGA3 356 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF654Q8IZM8 581 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 ADGRB2O60241 1585 aa6.91□□□□□ -1.3
HMGB1P23-201ENST00000518743 MYOM1P52179 1685 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 GDF9O60383 454 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 BICDL1Q6ZP65 573 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 AIDAQ96BJ3 306 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 C12orf49Q9H741 205 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 PPP4R2Q9NY27 417 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 FAM8A1Q9UBU6 413 aa6.9□□□□□ -1.3
HMGB1P23-201ENST00000518743 AATKQ6ZMQ8 1374 aa6.9□□□□□ -1.31
HMGB1P23-201ENST00000518743 TIMP2P16035 220 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 ST13P50502 369 aaKnown RBP6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 C9orf131Q5VYM1 1079 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 SUSD3Q96L08 255 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 AGBL1Q96MI9 1066 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 TINF2Q9BSI4 451 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 CAPN10Q9HC96 672 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 CUEDC1Q9NWM3 386 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 TNS2Q63HR2 1409 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms