RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TSPYL1Q9H0U9 437 aa15.71■□□□□ 0.1
SH3TC1-225ENST00000515682 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 AKAP17AQ02040 695 aaKnown RBP15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 AXDND1Q5T1B0 1012 aaPredicted RBP15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 PHACTR2O75167 634 aa15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 RRP12Q5JTH9 1297 aaKnown RBP15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 CCDC82Q8N4S0 544 aa15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
SH3TC1-225ENST00000515682 SYKP43405 635 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 MRFAP1L1Q96HT8 127 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 MAP3K5Q99683 1374 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 A0A087WZG4 1122 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 SPTLC2O15270 562 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 PCMTD1Q96MG8 357 aaPredicted RBP15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 LGR6Q9HBX8 967 aa15.69■□□□□ 0.1
SH3TC1-225ENST00000515682 CAGE1Q8TC20 777 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 MPHOSPH8Q99549 860 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 ELP1O95163 1332 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 GLI2P10070 1586 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 KCNQ3O43525 872 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 DDB1Q16531 1140 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 MCMDC2Q4G0Z9 681 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 KLF18A0A0U1RQI7 1052 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 IPO7O95373 1038 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 PGBD1Q96JS3 809 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 SEC31AO94979 1220 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 GPTP24298 496 aa15.68■□□□□ 0.1
SH3TC1-225ENST00000515682 IFIT1P09914 478 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 ANKRD20A12PQ8NF67 263 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 TLR7Q9NYK1 1049 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 TULP1O00294 542 aaPredicted RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 FILIP1LQ4L180 1135 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 COPS6Q7L5N1 327 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 CTIFO43310 598 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 FANCCQ00597 558 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 DHX32Q7L7V1 743 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 MAP4K1Q92918 833 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 LZTFL1Q9NQ48 299 aa15.67■□□□□ 0.1
SH3TC1-225ENST00000515682 KIF5CO60282 957 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 OAS2P29728 719 aaKnown RBP15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 ZNF589Q86UQ0 364 aaPredicted RBP15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 DCAF5Q96JK2 942 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 VPS18Q9P253 973 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 SHPRHQ149N8 1683 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 CAPN2P17655 700 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 GOLGA8FQ08AF8 430 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 GOLGA8DPQ0D2H9 430 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 PLA2G4DQ86XP0 818 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
SH3TC1-225ENST00000515682 ALDH1L1O75891 902 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 SYCP1Q15431 976 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 TFCP2Q12800 502 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 CCDC158Q5M9N0 1113 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 ZNF335Q9H4Z2 1342 aaPredicted RBP15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 CLCN6P51797 869 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 HSP90AB3PQ58FF7 597 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 PPP1R13BQ96KQ4 1090 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 MICU3Q86XE3 530 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 SMARCE1Q969G3 411 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 RSPH14Q9UHP6 348 aa15.65■□□□□ 0.1
SH3TC1-225ENST00000515682 DPCR1Q3MIW9 517 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 BEND3Q5T5X7 828 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 SRRTQ9BXP5 876 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 AATKQ6ZMQ8 1374 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 ARHGEF40Q8TER5 1519 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 ETF1P62495 437 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 FUCA2Q9BTY2 467 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 H0YHG0 523 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 RXRAP19793 462 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 TRMT112Q9UI30 125 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
SH3TC1-225ENST00000515682 USP6P35125 1406 aa15.63■□□□□ 0.09
SH3TC1-225ENST00000515682 PPP2R3AQ06190 1150 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms