RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 JCADQ9P266 1359 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 EIF3FO00303 357 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-208ENST00000514335 SPTLC2O15270 562 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 ZMYND10O75800 440 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 ZNF16P17020 682 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-208ENST00000514335 ANKRD45Q5TZF3 282 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 PACS1Q6VY07 963 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 ANKRD13DQ6ZTN6 518 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 SAMD14Q8IZD0 417 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-208ENST00000514335 MYOCDQ8IZQ8 938 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 TRIM37O94972 964 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 HNRNPUL2Q1KMD3 747 aaKnown RBP8.44□□□□□ -1.06
NIPBL-208ENST00000514335 MRFAP1L1Q96HT8 127 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 POLKQ9UBT6 870 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 HDAC9Q9UKV0 1011 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 NOL7Q9UMY1 257 aaKnown RBP8.44□□□□□ -1.06
NIPBL-208ENST00000514335 TMEM131LA2VDJ0 1609 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
NIPBL-208ENST00000514335 TSPY4P0CV99 314 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 TSPY10P0CW01 314 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 RBP3P10745 1247 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 ZNF131P52739 623 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 HSPA2P54652 639 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 PDCD2Q16342 344 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-208ENST00000514335 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 NDUFAF2Q8N183 169 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 GIMAP1Q8WWP7 306 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 SH3GL3Q99963 347 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 PIF1Q9H611 641 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 TMEM110-MUSTN1A8MSY1 372 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 FGFR1OPO95684 399 aaKnown RBP8.43□□□□□ -1.06
NIPBL-208ENST00000514335 MYL1P05976 194 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 PYGBP11216 843 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 FNBP4Q8N3X1 1017 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-208ENST00000514335 ATRIPQ8WXE1 791 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.43□□□□□ -1.06
NIPBL-208ENST00000514335 AS3MTQ9HBK9 375 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 KMT5AQ9NQR1 393 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 TBK1Q9UHD2 729 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 ZFYVE9O95405 1425 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 LINC00854A0A1B0GVQ3 168 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 ACBD5Q5T8D3 534 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-208ENST00000514335 BHMTQ93088 406 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 CLIP3Q96DZ5 547 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 MTRQ99707 1265 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 SEL1LQ9UBV2 794 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 ODF2LQ9ULJ1 636 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 MAFFQ9ULX9 164 aa8.43□□□□□ -1.06
NIPBL-208ENST00000514335 PABPN1LA6NDY0 278 aaKnown RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 MYO1CO00159 1063 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 PLEKHG6Q3KR16 790 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 CCBE1Q6UXH8 406 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 ARMC9Q7Z3E5 817 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 PARP9Q8IXQ6 854 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 RAVER1Q8IY67 606 aaKnown RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 EFCAB13Q8IY85 973 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 PDCL2Q8N4E4 241 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 ZNF483Q8TF39 744 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 GBP4Q96PP9 640 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 TRIM7Q9C029 511 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 ZHX3Q9H4I2 956 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 SPC25Q9HBM1 224 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 XPCQ01831 940 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 USP4Q13107 963 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 SNX1Q13596 522 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 CAPS2Q9BXY5 557 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 RPAP3Q9H6T3 665 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-208ENST00000514335 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
NIPBL-208ENST00000514335 AMPD3Q01432 767 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 PDIA5Q14554 519 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 LCA5Q86VQ0 697 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 C8orf37Q96NL8 207 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 ESF1Q9H501 851 aaKnown RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 GRPEL1Q9HAV7 217 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 MTUS2Q5JR59 1369 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 FLIIQ13045 1269 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 RABL6Q3YEC7 729 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 MCM10Q7L590 875 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 DCLK2Q8N568 766 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 AK7Q96M32 723 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 BAG1Q99933 345 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 ZNF446Q9NWS9 450 aa8.41□□□□□ -1.06
NIPBL-208ENST00000514335 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-208ENST00000514335 MYOM3Q5VTT5 1437 aa8.4□□□□□ -1.06
NIPBL-208ENST00000514335 TRIM29Q14134 588 aa8.4□□□□□ -1.06
NIPBL-208ENST00000514335 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
NIPBL-208ENST00000514335 CCDC144BQ3MJ40 725 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms