RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZSWIM6	Q9HCJ5	1215 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	MAP3K19	Q56UN5	1328 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	LMOD1	P29536	600 aa	Predicted RBP	12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	CCT4	P50991	539 aa	Known RBP	12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	CLASRP	Q8N2M8	674 aa	Known RBP	12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	EYA1	Q99502	592 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	FSD1	Q9BTV5	496 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	NAT10	Q9H0A0	1025 aa	Known RBP	12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	AKAP2	Q9Y2D5	859 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	PNPLA6	Q8IY17	1366 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	FRMPD1	Q5SYB0	1578 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	CAMSAP1	Q5T5Y3	1602 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	TDO2	P48775	406 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	LRRC31	Q6UY01	552 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	AACS	Q86V21	672 aa		12.87	□□□□□ -0.35
PDCD6-210	ENST00000513582	TTC41P	Q6P2S7	1318 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	LTK	P29376	864 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	LIG3	P49916	1009 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	RIC3	Q7Z5B4	369 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	BRF1	Q92994	677 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	PUF60	Q9UHX1	559 aa	Known RBP	12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	MET	P08581	1390 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	ATP8B2	P98198	1209 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	DPCR1	Q3MIW9	517 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	KLHDC4	Q8TBB5	520 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	DONSON	Q9NYP3	566 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	NEO1	Q92859	1461 aa		12.86	□□□□□ -0.35
PDCD6-210	ENST00000513582	ATP6V1A	P38606	617 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	CNNM3	Q8NE01	707 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	PI4K2B	Q8TCG2	481 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	LRRC2	Q9BYS8	371 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	GNAT3	A8MTJ3	354 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	ME1	P48163	572 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	TADA2B	Q86TJ2	420 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	GOLGA1	Q92805	767 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	TUBGCP6	Q96RT7	1819 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	CTAGE5	O15320	804 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	HSP90B2P	Q58FF3	399 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	FSIP1	Q8NA03	581 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	DHX58	Q96C10	678 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	RABEP2	Q9H5N1	569 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	CHPF2	Q9P2E5	772 aa		12.85	□□□□□ -0.35
PDCD6-210	ENST00000513582	CCP110	O43303	1012 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	SLC39A6	Q13433	755 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	TUBB4A	P04350	444 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	CWF19L2	Q2TBE0	894 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	SUGP1	Q8IWZ8	645 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	CFAP45	Q9UL16	551 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	RBM8A	Q9Y5S9	174 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	EPB41L2	O43491	1005 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	ATP1A3	P13637	1013 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	TXLNA	P40222	546 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	KARS	Q15046	597 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	FBXW10	Q5XX13	1052 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	RAB11FIP4	Q86YS3	637 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	EFCAB13	Q8IY85	973 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	RABGGTA	Q92696	567 aa		12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	MKRN1	Q9UHC7	482 aa	Known RBP	12.84	□□□□□ -0.35
PDCD6-210	ENST00000513582	VWA3A	A6NCI4	1184 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	KCNQ3	O43525	872 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	GUCY1B3	Q02153	619 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	JAKMIP3	Q5VZ66	844 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	CREB3L3	Q68CJ9	461 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	CARD10	Q9BWT7	1032 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	ADCY9	O60503	1353 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	CCDC151	A5D8V7	595 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	IBSP	P21815	317 aa	Predicted RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	RSRC2	Q7L4I2	434 aa	Known RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	HDX	Q7Z353	690 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	GPATCH3	Q96I76	525 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	FAM204A	Q9H8W3	233 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	MRFAP1	Q9Y605	127 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	TAF6L	Q9Y6J9	622 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	PRR36	Q9H6K5	1346 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	BTBD11	A6QL63	1104 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	MAP2K7	O14733	419 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	EIF3J	O75822	258 aa	Known RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	ERLIN2	O94905	339 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	RHOXF2B	P0C7M4	288 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	GSC	P56915	257 aa	Predicted RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	MAP3K9	P80192	1104 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	HSP90AA4P	Q58FG1	418 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	BLOC1S2	Q6QNY1	142 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	PDILT	Q8N807	584 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	KAT2B	Q92831	832 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	RHOXF2	Q9BQY4	288 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582	LGR6	Q9HBX8	967 aa		12.83	□□□□□ -0.36
PDCD6-210	ENST00000513582		A0A1B0GVL5	298 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	REST	Q13127	1097 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	PPP2R2C	Q9Y2T4	447 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	SERPINC1	P01008	464 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	DHX8	Q14562	1220 aa	Known RBP	12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	CFAP100	Q494V2	611 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	RHPN1	Q8TCX5	695 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	IRX2	Q9BZI1	471 aa	Predicted RBP	12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 345.5 ms