RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
DDR1-271ENST00000513240 IL17RAQ96F46 866 aa17.25■□□□□ 0.35
DDR1-271ENST00000513240 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
DDR1-271ENST00000513240 MST1RQ04912 1400 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 ZNF335Q9H4Z2 1342 aaPredicted RBP17.24■□□□□ 0.35
DDR1-271ENST00000513240 H7C1W4 665 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 PYCARDQ9ULZ3 195 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
DDR1-271ENST00000513240 CCDC144CPQ8IYA2 1237 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
DDR1-271ENST00000513240 PHF14O94880 888 aa17.23■□□□□ 0.35
DDR1-271ENST00000513240 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
DDR1-271ENST00000513240 SMIM5Q71RC9 77 aa17.23■□□□□ 0.35
DDR1-271ENST00000513240 KCNB2Q92953 911 aa17.23■□□□□ 0.35
DDR1-271ENST00000513240 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
DDR1-271ENST00000513240 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
DDR1-271ENST00000513240 ZAP70P43403 619 aa17.23■□□□□ 0.35
DDR1-271ENST00000513240 LEO1Q8WVC0 666 aaPredicted RBP17.22■□□□□ 0.35
DDR1-271ENST00000513240 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 EYA2O00167 538 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
DDR1-271ENST00000513240 TERF2Q15554 542 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 CEP126Q9P2H0 1117 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 SLIT3O75094 1523 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 PIGBQ92521 554 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 XAGE2Q96GT9 111 aa17.22■□□□□ 0.35
DDR1-271ENST00000513240 C5P01031 1676 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 IL2RBP14784 551 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
DDR1-271ENST00000513240 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 MAST3O60307 1309 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 E7EWF7 191 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
DDR1-271ENST00000513240 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
DDR1-271ENST00000513240 APPP05067 770 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 KCNQ4P56696 695 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 TMEM87AQ8NBN3 555 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
DDR1-271ENST00000513240 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
DDR1-271ENST00000513240 GREM2Q9H772 168 aa17.19■□□□□ 0.34
DDR1-271ENST00000513240 DDX41Q9UJV9 622 aaKnown RBP17.19■□□□□ 0.34
DDR1-271ENST00000513240 UBE2Q2LH0YL09 131 aa17.19■□□□□ 0.34
DDR1-271ENST00000513240 TYRO3Q06418 890 aa17.19■□□□□ 0.34
DDR1-271ENST00000513240 ACSBG1Q96GR2 724 aa17.19■□□□□ 0.34
DDR1-271ENST00000513240 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
DDR1-271ENST00000513240 SLC20A2Q08357 652 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 LRMPQ12912 555 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 KCNF1Q9H3M0 494 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 ST7Q9NRC1 585 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDR1-271ENST00000513240 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
DDR1-271ENST00000513240 IDH1O75874 414 aaKnown RBP17.18■□□□□ 0.34
DDR1-271ENST00000513240 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 TEX2Q8IWB9 1127 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 FUCA2Q9BTY2 467 aa17.18■□□□□ 0.34
DDR1-271ENST00000513240 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
DDR1-271ENST00000513240 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
DDR1-271ENST00000513240 RNF113AO15541 343 aaKnown RBP17.17■□□□□ 0.34
DDR1-271ENST00000513240 PTGS1P23219 599 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
DDR1-271ENST00000513240 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
DDR1-271ENST00000513240 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
DDR1-271ENST00000513240 FGAP02671 866 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 CCDC192P0DO97 292 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 RESTQ13127 1097 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 SLC4A9Q96Q91 983 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms