RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 UBXN1Q04323 297 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 MAGEB6P1A0A0J9YX57 407 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 TTC12Q9H892 705 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 CNNM2Q9H8M5 875 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 IDI1Q13907 227 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 HDAC1Q13547 482 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 LMBR1LQ6UX01 489 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLCD3Q8N3E9 789 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 ARFGAP3Q9NP61 516 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 LZTFL1Q9NQ48 299 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 PAG1Q9NWQ8 432 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC6Q16204 474 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 FAM200AQ8TCP9 573 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 GUCA1BQ9UMX6 200 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 MSL1Q68DK7 614 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NSRP1Q9H0G5 558 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 TACC1O75410 805 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 GRM1Q13255 1194 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DNAJC21Q5F1R6 531 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 JAG2Q9Y219 1238 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NSD2O96028 1365 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 PSMA7O14818 248 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 KRT2P35908 639 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DDX23Q9BUQ8 820 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 VTI1AQ96AJ9 217 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 MPHOSPH6Q99547 160 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 IQGAP2Q13576 1575 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 CAVIN2O95810 425 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 RHOXF2BP0C7M4 288 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 MAGEB6Q8N7X4 407 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 IFT81Q8WYA0 676 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 RHOXF2Q9BQY4 288 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 SPTLC2O15270 562 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 TYRO3Q06418 890 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 SREK1Q8WXA9 508 aaKnown RBP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 GRM8O00222 908 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZFYP08048 801 aaPredicted RBP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 AK2P54819 239 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLVAPQ9BX97 442 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 FAM13AO94988 1023 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZNF569Q5MCW4 686 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 GOLGA1Q92805 767 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 VPS18Q9P253 973 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 IL16Q14005 1332 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TIGD1Q96MW7 591 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC129Q6ZRS4 1044 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TMTC2Q8N394 836 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TNNI2P48788 182 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 ATP8B2P98198 1209 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 BMP15O95972 392 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZKSCAN3Q9BRR0 538 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC160A6NGH7 325 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 RRP36Q96EU6 259 aaKnown RBP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 OPA1O60313 960 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 SPATA24Q86W54 205 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC25Q86WR0 208 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 TFCP2Q12800 502 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZCRB1Q8TBF4 217 aaKnown RBP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 TCHPQ9BT92 498 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 C6orf50Q9HD87 102 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 SYT10Q6XYQ8 523 aa19.64■□□□□ 0.74
ARHGEF28-212ENST00000513042 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 NEK11Q8NG66 645 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 DDX12PQ92771 950 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 ZGPATQ8N5A5 531 aaKnown RBP19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 TRIM75PA6NK02 468 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 USP37Q86T82 979 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 PPP1R9BQ96SB3 815 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 RIMBP2O15034 1052 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 PSMC4P43686 418 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 SP4Q02446 784 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 KIF5AQ12840 1032 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 CREB3L3Q68CJ9 461 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RTL9Q8NET4 1388 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RNF113AO15541 343 aaKnown RBP19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.731e-8■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms