RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ZNF609O15014 1411 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 USP17L3A6NCW0 530 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 USP17L4A6NCW7 530 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 KCNJ4P48050 445 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 USP17L1Q7RTZ2 530 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 SAMD7Q7Z3H4 446 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 AGBL3Q8NEM8 1001 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 RIPOR2Q9Y4F9 1068 aa14.6□□□□□ -0.07
SH3RF1-205ENST00000511421 EGFRP00533 1210 aa14.59□□□□□ -0.07
SH3RF1-205ENST00000511421 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
SH3RF1-205ENST00000511421 ZC3H15Q8WU90 426 aaKnown RBP14.59□□□□□ -0.07
SH3RF1-205ENST00000511421 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 TRIM27P14373 513 aa14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 FMR1Q06787 632 aaKnown RBP eCLIP14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 TBC1D10BQ4KMP7 808 aaPredicted RBP14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 DACT2Q5SW24 774 aa14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 TNNQ9UQP3 1299 aa14.58□□□□□ -0.07
SH3RF1-205ENST00000511421 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 PLIN1O60240 522 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 UBTFL1P0CB47 393 aaPredicted RBP14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 RFX5P48382 616 aaPredicted RBP14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 ZNF280AP59817 542 aaPredicted RBP14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 LRRC24Q50LG9 513 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 STRIP1Q5VSL9 837 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 CD209Q9NNX6 404 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 PSME4Q14997 1843 aa14.58□□□□□ -0.08
SH3RF1-205ENST00000511421 TRAF5O00463 557 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 KLHDC4Q8TBB5 520 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 MEIS3Q99687 375 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 MXD3Q9BW11 206 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 A0A1B0GUL6 1792 aa14.57□□□□□ -0.08
SH3RF1-205ENST00000511421 UBE4AQ14139 1066 aa14.56□□□□□ -0.08
SH3RF1-205ENST00000511421 RBM26Q5T8P6 1007 aaKnown RBP14.56□□□□□ -0.08
SH3RF1-205ENST00000511421 JMYQ8N9B5 988 aa14.56□□□□□ -0.08
SH3RF1-205ENST00000511421 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-205ENST00000511421 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-205ENST00000511421 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 USP17L8P0C7I0 530 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 PTPN12Q05209 780 aaKnown RBP14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 KIF4BQ2VIQ3 1234 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 TTLL5Q6EMB2 1281 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 IL1R1P14778 569 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 GTF2IP78347 998 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 CST9Q5W186 159 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 VGLL2Q8N8G2 317 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 FBXW7Q969H0 707 aa14.55□□□□□ -0.08
SH3RF1-205ENST00000511421 MYO3BQ8WXR4 1341 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 ZNF646O15015 1829 aaPredicted RBP14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 METTL24Q5JXM2 366 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 CDC37L1Q7L3B6 337 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 ZNF804AQ7Z570 1209 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 MKRN1Q9UHC7 482 aaKnown RBP14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 HDAC5Q9UQL6 1122 aa14.54□□□□□ -0.08
SH3RF1-205ENST00000511421 CNTNAP1P78357 1384 aa14.53□□□□□ -0.08
SH3RF1-205ENST00000511421 EYA2O00167 538 aa14.53□□□□□ -0.08
SH3RF1-205ENST00000511421 FAM84BQ96KN1 310 aaPredicted RBP14.53□□□□□ -0.08
SH3RF1-205ENST00000511421 MYOZ2Q9NPC6 264 aa14.53□□□□□ -0.08
SH3RF1-205ENST00000511421 ASTN2O75129 1339 aaPredicted RBP14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 PDE8BO95263 885 aa14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 GNAI3P08754 354 aa14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 DLK2Q6UY11 383 aa14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 ATG9AQ7Z3C6 839 aa14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 USP48Q86UV5 1035 aa14.52□□□□□ -0.08
SH3RF1-205ENST00000511421 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 HIBADHP31937 336 aaKnown RBP14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 GYG1P46976 350 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 SCARF1Q14162 830 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 CERS5Q8N5B7 392 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 TMEM57Q8N5G2 664 aa14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 TDRD7Q8NHU6 1098 aaKnown RBP14.52□□□□□ -0.09
SH3RF1-205ENST00000511421 SASH1O94885 1247 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 CELF2O95319 508 aaKnown RBP14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 FGFR2P21802 821 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 FBXO33Q7Z6M2 555 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 KIAA0825Q8IV33 1275 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 OGFOD1Q8N543 542 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 DCPSQ96C86 337 aaKnown RBP14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 GGA3Q9NZ52 723 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
SH3RF1-205ENST00000511421 CIAO1O76071 339 aa14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 MMP14P50281 582 aa14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 MTX1Q13505 466 aa14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 COPRSQ9NQ92 184 aa14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 PA2G4Q9UQ80 394 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 POLR2AP24928 1970 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 FAM205AQ6ZU69 1335 aa14.5□□□□□ -0.09
SH3RF1-205ENST00000511421 ADM5C9JUS6 153 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 VEGFBP49765 207 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 DEFB115Q30KQ5 88 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 NBPF9Q3BBW0 867 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 TRPM7Q96QT4 1865 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 SIL1Q9H173 461 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms