RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 SCRN1Q12765 414 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 ERO1AQ96HE7 468 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 ALG1Q9BT22 464 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 TAF6LQ9Y6J9 622 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 VIRMAQ69YN4 1812 aaKnown RBP17.21■□□□□ 0.35
USP38-202ENST00000510377 AP5Z1O43299 807 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 KIF20AO95235 890 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
USP38-202ENST00000510377 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 USP6P35125 1406 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
USP38-202ENST00000510377 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
USP38-202ENST00000510377 CDKL5O76039 1030 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 CHGBP05060 677 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 CYP21A2P08686 494 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
USP38-202ENST00000510377 KARSQ15046 597 aaKnown RBP17.2■□□□□ 0.34
USP38-202ENST00000510377 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
USP38-202ENST00000510377 CPS1P31327 1500 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 GCP02774 474 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 GPTP24298 496 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 GCKRQ14397 625 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 SPTLC3Q9NUV7 552 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 CRB1P82279 1406 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP38-202ENST00000510377 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
USP38-202ENST00000510377 DBNLQ9UJU6 430 aaKnown RBP17.2■□□□□ 0.34
USP38-202ENST00000510377 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
USP38-202ENST00000510377 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 CCDC102AQ96A19 550 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 SLC26A6Q9BXS9 759 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
USP38-202ENST00000510377 IPO7O95373 1038 aaKnown RBP17.19■□□□□ 0.34
USP38-202ENST00000510377 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 NCOA7Q8NI08 942 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 TBX22Q9Y458 520 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 HOXB7P09629 217 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
USP38-202ENST00000510377 IARSP41252 1262 aaKnown RBP17.19■□□□□ 0.34
USP38-202ENST00000510377 TDO2P48775 406 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 CCDC102BQ68D86 513 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
USP38-202ENST00000510377 LMTK2Q8IWU2 1503 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 USP27XA6NNY8 438 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
USP38-202ENST00000510377 TOB2Q14106 344 aaPredicted RBP17.18■□□□□ 0.34
USP38-202ENST00000510377 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 BBXQ8WY36 941 aaPredicted RBP17.18■□□□□ 0.34
USP38-202ENST00000510377 AK7Q96M32 723 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 ELP1O95163 1332 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
USP38-202ENST00000510377 CALCOCO1Q9P1Z2 691 aa17.18■□□□□ 0.34
USP38-202ENST00000510377 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 TIGD1Q96MW7 591 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 GOLGA8FQ08AF8 430 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 GOLGA8DPQ0D2H9 430 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
USP38-202ENST00000510377 LEKR1Q6ZMV7 388 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 KBTBD3Q8NAB2 608 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
USP38-202ENST00000510377 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 TOM1O60784 492 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 ZNF202O95125 648 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 LMAN1P49257 510 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 FAM193AP78312 1265 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 FANCCQ00597 558 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 MCM6Q14566 821 aa17.17■□□□□ 0.34
USP38-202ENST00000510377 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 RNF113AO15541 343 aaKnown RBP17.16■□□□□ 0.34
USP38-202ENST00000510377 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 E7EWF7 191 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 TMEM67Q5HYA8 995 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 TMEM2Q9UHN6 1383 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 NDUFA8P51970 172 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
USP38-202ENST00000510377 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
USP38-202ENST00000510377 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
USP38-202ENST00000510377 ATP5JP18859 108 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 STX17P56962 302 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 IFIT5Q13325 482 aaKnown RBP17.15■□□□□ 0.34
USP38-202ENST00000510377 DPCR1Q3MIW9 517 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 NAPBQ9H115 298 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 LZTFL1Q9NQ48 299 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 DACH1Q9UI36 760 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms