RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 CAMTA2O94983 1202 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 GPTP24298 496 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 PSMA5P28066 241 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 CRKLP46109 303 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 SIK1P57059 783 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 LSM11P83369 360 aaKnown RBP eCLIP5.71□□□□□ -1.51e-7■■■■■ 32.8
PDLIM5-214ENST00000510099 IFIT5Q13325 482 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 ITPK1Q13572 414 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 VPS72Q15906 364 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 KLHL40Q2TBA0 621 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 ADCK5Q3MIX3 580 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 ZMYM1Q5SVZ6 1142 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 L1TD1Q5T7N2 865 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 RNF20Q5VTR2 975 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 INTS5Q6P9B9 1019 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 NOL8Q76FK4 1167 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 DDX46Q7L014 1031 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 DZIP3Q86Y13 1208 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 VGLL2Q8N8G2 317 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 TTLL11Q8NHH1 800 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 SMARCC1Q92922 1105 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 AK7Q96M32 723 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 ALDH8A1Q9H2A2 487 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 SH2B1Q9NRF2 756 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 PDRG1Q9NUG6 133 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 PAG1Q9NWQ8 432 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 CEP126Q9P2H0 1117 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 LIMCH1Q9UPQ0 1083 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 AKAP2Q9Y2D5 859 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 CYP46A1Q9Y6A2 500 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 NDUFB9Q9Y6M9 179 aa5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 COL5A3P25940 1745 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-214ENST00000510099 BCORQ6W2J9 1755 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 RTL9Q8NET4 1388 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 SCN7AQ01118 1682 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 NUTM2BA6NNL0 878 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 NUTM2EB1AL46 878 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 GOLIM4O00461 696 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 IRS4O14654 1257 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 RGL2O15211 777 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 PDE8AO60658 829 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 LARGE1O95461 756 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 CPA1P15085 419 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ITGA6P23229 1130 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 RPS6KB1P23443 525 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ADORA1P30542 326 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 KCNJ4P48050 445 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 PIP4K2BP78356 416 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ST3GAL1Q11201 340 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 KRT32Q14532 448 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 PARP10Q53GL7 1025 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 TAF7LQ5H9L4 462 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 SYNE4Q8N205 404 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ACSBG1Q96GR2 724 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 NEUROD6Q96NK8 337 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 DSCC1Q9BVC3 393 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 GREM2Q9H772 168 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 LMBRD1Q9NUN5 540 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 TRMT112Q9UI30 125 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 RIPOR2Q9Y4F9 1068 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 TAF6LQ9Y6J9 622 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ATRNO75882 1429 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 MAST3O60307 1309 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 CNTNAP4Q9C0A0 1308 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 WDR33Q9C0J8 1336 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 LAMB2P55268 1798 aa5.7□□□□□ -1.5
PDLIM5-214ENST00000510099 ARAP2Q8WZ64 1704 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 ANKRD18BA2A2Z9 1011 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 RNF113AO15541 343 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 NTSR2O95665 410 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 CHGBP05060 677 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 IFIT1P09914 478 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 ATP6V1AP38606 617 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 TIMM10P62072 90 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 COL9A3Q14050 684 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 ANKRD1Q15327 319 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 TTC39AQ5SRH9 613 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 MCTP1Q6DN14 999 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 BLOC1S2Q6QNY1 142 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC129Q6ZRS4 1044 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 FNBP4Q8N3X1 1017 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 TMEM87AQ8NBN3 555 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 XAGE2Q96GT9 111 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 ZNF512BQ96KM6 892 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 CCDC85AQ96PX6 553 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 SEC62Q99442 399 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 PLA2G2EQ9NZK7 142 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 TBC1D2BQ9UPU7 963 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 NHSQ6T4R5 1651 aa5.69□□□□□ -1.5
PDLIM5-214ENST00000510099 UBAP1LF5GYI3 381 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms