RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
SNF8-206ENST00000509989 TNIP1Q15025 636 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 ATG9AQ7Z3C6 839 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 SIL1Q9H173 461 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
SNF8-206ENST00000509989 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
SNF8-206ENST00000509989 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
SNF8-206ENST00000509989 G3V3G9 751 aa17■□□□□ 0.31
SNF8-206ENST00000509989 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
SNF8-206ENST00000509989 KCNJ4P48050 445 aa17■□□□□ 0.31
SNF8-206ENST00000509989 FSTL1Q12841 308 aa17■□□□□ 0.31
SNF8-206ENST00000509989 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
SNF8-206ENST00000509989 DZIP1LQ8IYY4 767 aaKnown RBP17■□□□□ 0.31
SNF8-206ENST00000509989 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
SNF8-206ENST00000509989 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 ITGBL1O95965 494 aaPredicted RBP16.99■□□□□ 0.31
SNF8-206ENST00000509989 GYG1P46976 350 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
SNF8-206ENST00000509989 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 LDHDQ86WU2 507 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 GMLQ99445 158 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 CD209Q9NNX6 404 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
SNF8-206ENST00000509989 EYA2O00167 538 aa16.98■□□□□ 0.31
SNF8-206ENST00000509989 TBC1D10BQ4KMP7 808 aaPredicted RBP16.98■□□□□ 0.31
SNF8-206ENST00000509989 METTL24Q5JXM2 366 aa16.98■□□□□ 0.31
SNF8-206ENST00000509989 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
SNF8-206ENST00000509989 C15orf52Q6ZUT6 534 aaKnown RBP16.98■□□□□ 0.31
SNF8-206ENST00000509989 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
SNF8-206ENST00000509989 FBXW7Q969H0 707 aa16.98■□□□□ 0.31
SNF8-206ENST00000509989 ADARB2Q9NS39 739 aaKnown RBP16.98■□□□□ 0.31
SNF8-206ENST00000509989 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
SNF8-206ENST00000509989 TRPM7Q96QT4 1865 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SNF8-206ENST00000509989 GNAI3P08754 354 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 GTF2IP78347 998 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 CERS5Q8N5B7 392 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
SNF8-206ENST00000509989 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
SNF8-206ENST00000509989 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
SNF8-206ENST00000509989 PASKQ96RG2 1323 aa16.96■□□□□ 0.31
SNF8-206ENST00000509989 TRAF5O00463 557 aa16.96■□□□□ 0.31
SNF8-206ENST00000509989 DPF2Q92785 391 aa16.96■□□□□ 0.31
SNF8-206ENST00000509989 MROH5Q6ZUA9 1318 aa16.96■□□□□ 0.3
SNF8-206ENST00000509989 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 PDE8BO95263 885 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 GNAI2P04899 355 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 FGFR2P21802 821 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 MTX1Q13505 466 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
SNF8-206ENST00000509989 PNMA8AQ86V59 439 aaPredicted RBP16.95■□□□□ 0.3
SNF8-206ENST00000509989 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
SNF8-206ENST00000509989 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
SNF8-206ENST00000509989 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 ARAP2Q8WZ64 1704 aa16.95■□□□□ 0.3
SNF8-206ENST00000509989 IL1R1P14778 569 aa16.94■□□□□ 0.3
SNF8-206ENST00000509989 GRIK5Q16478 980 aa16.94■□□□□ 0.3
SNF8-206ENST00000509989 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
SNF8-206ENST00000509989 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
SNF8-206ENST00000509989 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
SNF8-206ENST00000509989 COG6Q9Y2V7 657 aa16.94■□□□□ 0.3
SNF8-206ENST00000509989 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
SNF8-206ENST00000509989 BCAMP50895 628 aa16.93■□□□□ 0.3
SNF8-206ENST00000509989 APLP1P51693 650 aa16.93■□□□□ 0.3
SNF8-206ENST00000509989 DNAJC5GQ8N7S2 189 aa16.93■□□□□ 0.3
SNF8-206ENST00000509989 ZNF609O15014 1411 aa16.93■□□□□ 0.3
SNF8-206ENST00000509989 AOX1Q06278 1338 aa16.93■□□□□ 0.3
SNF8-206ENST00000509989 H7C1D1 291 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 ADORA1P30542 326 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
SNF8-206ENST00000509989 STRIP1Q5VSL9 837 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 KIAA0825Q8IV33 1275 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
SNF8-206ENST00000509989 PGAP2Q9UHJ9 254 aa16.92■□□□□ 0.3
SNF8-206ENST00000509989 COL1A1P02452 1464 aaPredicted RBP16.92■□□□□ 0.3
SNF8-206ENST00000509989 CIAO1O76071 339 aa16.91■□□□□ 0.3
SNF8-206ENST00000509989 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
SNF8-206ENST00000509989 KIF4BQ2VIQ3 1234 aa16.91■□□□□ 0.3
SNF8-206ENST00000509989 ZNF804AQ7Z570 1209 aa16.91■□□□□ 0.3
SNF8-206ENST00000509989 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
SNF8-206ENST00000509989 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
SNF8-206ENST00000509989 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
SNF8-206ENST00000509989 TFCP2Q12800 502 aa16.9■□□□□ 0.3
SNF8-206ENST00000509989 POLA2Q14181 598 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms