RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 COBLO75128 1261 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 WISP1O95388 367 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 TGFB1P01137 390 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 ZAP70P43403 619 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 CD97P48960 835 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 ARMC10Q8N2F6 343 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 CARD10Q9BWT7 1032 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 CEP41Q9BYV8 373 aa6.63□□□□□ -1.35
SMARCA5-202ENST00000508573 COL17A1Q9UMD9 1497 aaPredicted RBP6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 FSCN2O14926 492 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 DDX3YO15523 660 aaKnown RBP6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 DUOXA2Q1HG44 320 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 NCAPG2Q86XI2 1143 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 UTP4Q969X6 686 aaKnown RBP6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 GZF1Q9H116 711 aaPredicted RBP6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 GOLGA2P5Q9HBQ8 144 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 ZMIZ1Q9ULJ6 1067 aa6.62□□□□□ -1.35
SMARCA5-202ENST00000508573 FAM177BA6PVY3 158 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 TNFRSF10BO14763 440 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 ZBTB39O15060 712 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 PAX4O43316 350 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 CYP2E1P05181 493 aaPredicted RBP6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 IRAK1P51617 712 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 ADAMTSL4Q6UY14 1074 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 KLHDC7BQ96G42 594 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 PBX4Q9BYU1 374 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 STIM2Q9P246 746 aa6.61□□□□□ -1.35
SMARCA5-202ENST00000508573 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 ELOAQ14241 798 aaKnown RBP6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 KIAA1211Q6ZU35 1233 aa6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 KLHL23Q8NBE8 558 aa6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 ABI2Q9NYB9 513 aaPredicted RBP6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
SMARCA5-202ENST00000508573 E9PSI1 815 aa6.59□□□□□ -1.35
SMARCA5-202ENST00000508573 SART1O43290 800 aaKnown RBP6.59□□□□□ -1.35
SMARCA5-202ENST00000508573 NFIAQ12857 509 aa6.59□□□□□ -1.35
SMARCA5-202ENST00000508573 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
SMARCA5-202ENST00000508573 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
SMARCA5-202ENST00000508573 TM4SF5O14894 197 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 TAL1P17542 331 aaPredicted RBP6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 PTPRAP18433 802 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 EPHA1P21709 976 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 TXKP42681 527 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 GP2P55259 537 aaKnown RBP6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 CEP120Q8N960 986 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 FAM46AQ96IP4 442 aaKnown RBP6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 KCNF1Q9H3M0 494 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 ELP3Q9H9T3 547 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
SMARCA5-202ENST00000508573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 KIF4AO95239 1232 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 GRIK1P39086 918 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 UVSSAQ2YD98 709 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 CNTN3Q9P232 1028 aa6.57□□□□□ -1.36
SMARCA5-202ENST00000508573 BTBD11A6QL63 1104 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 ADAM11O75078 769 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 ADAMTS4O75173 837 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 BMP3P12645 472 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 CABP4P57796 275 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 TMEM164Q5U3C3 297 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 ZNF438Q7Z4V0 828 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 ABTB2Q8N961 1025 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 NUDT16Q96DE0 195 aaKnown RBP6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 MYRFLQ96LU7 910 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 FAM83CQ9BQN1 747 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 ADAM19Q9H013 955 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 KANSL3Q9P2N6 904 aa6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.56□□□□□ -1.36
SMARCA5-202ENST00000508573 PRR19A6NJB7 356 aa6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 KIAA1324LA8MWY0 1029 aaPredicted RBP6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 SRPK2P78362 688 aaKnown RBP6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 PDE12Q6L8Q7 609 aaKnown RBP6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 ATCAYQ86WG3 371 aa6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 SLC7A3Q8WY07 619 aa6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 DBNDD2Q9BQY9 259 aa6.55□□□□□ -1.36
SMARCA5-202ENST00000508573 H3BRJ5 948 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 TRPA1O75762 1119 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 ATG7O95352 703 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 CES1P23141 567 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 NLRP12P59046 1061 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 USP35Q9P2H5 1018 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms