RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
RNF4-210ENST00000508235 WTIPA6NIX2 430 aaPredicted RBP18.61■□□□□ 0.57
RNF4-210ENST00000508235 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 RAD17O75943 681 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 POLA2Q14181 598 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 PUM3Q15397 648 aaKnown RBP18.61■□□□□ 0.57
RNF4-210ENST00000508235 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 ATG9AQ7Z3C6 839 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 RPAP2Q8IXW5 612 aaPredicted RBP18.61■□□□□ 0.57
RNF4-210ENST00000508235 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
RNF4-210ENST00000508235 VGLL2Q8N8G2 317 aa18.61■□□□□ 0.57
RNF4-210ENST00000508235 PA2G4Q9UQ80 394 aaKnown RBP18.61■□□□□ 0.57
RNF4-210ENST00000508235 IFIT1P09914 478 aaKnown RBP18.6■□□□□ 0.57
RNF4-210ENST00000508235 LMOD1P29536 600 aaPredicted RBP18.6■□□□□ 0.57
RNF4-210ENST00000508235 G3BP1Q13283 466 aaKnown RBP eCLIP18.6■□□□□ 0.57
RNF4-210ENST00000508235 TXNRD3Q86VQ6 643 aa18.6■□□□□ 0.57
RNF4-210ENST00000508235 SCN9AQ15858 1988 aa18.59■□□□□ 0.57
RNF4-210ENST00000508235 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
RNF4-210ENST00000508235 HMMRO75330 724 aa18.59■□□□□ 0.57
RNF4-210ENST00000508235 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
RNF4-210ENST00000508235 USP17L3A6NCW0 530 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 USP17L4A6NCW7 530 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 SNAP23O00161 211 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 PSMD14O00487 310 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 KIF3CO14782 793 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 SLC5A1P13866 664 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 RPS12P25398 132 aaKnown RBP18.58■□□□□ 0.56
RNF4-210ENST00000508235 KLRK1P26718 216 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 USP17L1Q7RTZ2 530 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 LPIN2Q92539 896 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 CD209Q9NNX6 404 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 HACL1Q9UJ83 578 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 AKAP2Q9Y2D5 859 aa18.58■□□□□ 0.56
RNF4-210ENST00000508235 SURF6O75683 361 aaKnown RBP18.57■□□□□ 0.56
RNF4-210ENST00000508235 VIL1P09327 827 aaKnown RBP18.57■□□□□ 0.56
RNF4-210ENST00000508235 HIBADHP31937 336 aaKnown RBP18.57■□□□□ 0.56
RNF4-210ENST00000508235 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
RNF4-210ENST00000508235 POTECB2RU33 542 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 IL1R1P14778 569 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 FGFR2P21802 821 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
RNF4-210ENST00000508235 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 DPF2Q92785 391 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 NOP58Q9Y2X3 529 aaKnown RBP18.56■□□□□ 0.56
RNF4-210ENST00000508235 ZNF609O15014 1411 aa18.56■□□□□ 0.56
RNF4-210ENST00000508235 MYO3BQ8WXR4 1341 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 TOMM70O94826 608 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 GMPSP49915 693 aaPredicted RBP18.55■□□□□ 0.56
RNF4-210ENST00000508235 SCNN1DP51172 638 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 HSP90AB4PQ58FF6 505 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
RNF4-210ENST00000508235 AGBL3Q8NEM8 1001 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
RNF4-210ENST00000508235 KCNQ5Q9NR82 932 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 GPRC5DQ9NZD1 345 aa18.55■□□□□ 0.56
RNF4-210ENST00000508235 EPHX2P34913 555 aa18.54■□□□□ 0.56
RNF4-210ENST00000508235 GYG1P46976 350 aa18.54■□□□□ 0.56
RNF4-210ENST00000508235 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
RNF4-210ENST00000508235 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
RNF4-210ENST00000508235 FAM84BQ96KN1 310 aaPredicted RBP18.54■□□□□ 0.56
RNF4-210ENST00000508235 ARAP2Q8WZ64 1704 aa18.54■□□□□ 0.56
RNF4-210ENST00000508235 H7C1D1 291 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 SASH1O94885 1247 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 TFCP2Q12800 502 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 AAMPQ13685 434 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
RNF4-210ENST00000508235 RBM46Q8TBY0 533 aaKnown RBP18.53■□□□□ 0.56
RNF4-210ENST00000508235 FBXW7Q969H0 707 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
RNF4-210ENST00000508235 MYH13Q9UKX3 1938 aa18.53■□□□□ 0.56
RNF4-210ENST00000508235 ZNF646O15015 1829 aaPredicted RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 FRAT2O75474 233 aaPredicted RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 MMP14P50281 582 aa18.52■□□□□ 0.56
RNF4-210ENST00000508235 GTF2IP78347 998 aa18.52■□□□□ 0.56
RNF4-210ENST00000508235 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 GNL3LQ9NVN8 582 aaKnown RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 CNOT7Q9UIV1 285 aaKnown RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
RNF4-210ENST00000508235 EPS15P42566 896 aa18.51■□□□□ 0.55
RNF4-210ENST00000508235 FKBP1AP62942 108 aaKnown RBP18.51■□□□□ 0.55
RNF4-210ENST00000508235 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
RNF4-210ENST00000508235 USP50Q70EL3 339 aaPredicted RBP18.51■□□□□ 0.55
RNF4-210ENST00000508235 MICALL2Q8IY33 904 aa18.51■□□□□ 0.55
RNF4-210ENST00000508235 CRBNQ96SW2 442 aa18.51■□□□□ 0.55
RNF4-210ENST00000508235 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
RNF4-210ENST00000508235 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
RNF4-210ENST00000508235 BCAMP50895 628 aa18.5■□□□□ 0.55
RNF4-210ENST00000508235 LDHDQ86WU2 507 aa18.5■□□□□ 0.55
RNF4-210ENST00000508235 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
RNF4-210ENST00000508235 SMC1BQ8NDV3 1235 aa18.5■□□□□ 0.55
RNF4-210ENST00000508235 FAM205AQ6ZU69 1335 aa18.49■□□□□ 0.55
RNF4-210ENST00000508235 USP17L8P0C7I0 530 aa18.49■□□□□ 0.55
RNF4-210ENST00000508235 TIMM10P62072 90 aa18.49■□□□□ 0.55
RNF4-210ENST00000508235 EAPPQ56P03 285 aaPredicted RBP18.49■□□□□ 0.55
RNF4-210ENST00000508235 OGFOD1Q8N543 542 aa18.49■□□□□ 0.55
RNF4-210ENST00000508235 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
RNF4-210ENST00000508235 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms