RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SMC1BQ8NDV3 1235 aa22.31■■□□□ 1.16
SMN1-204ENST00000506163 COA1Q9GZY4 146 aa22.31■■□□□ 1.16
SMN1-204ENST00000506163 PA2G4Q9UQ80 394 aaKnown RBP22.31■■□□□ 1.16
SMN1-204ENST00000506163 MROH5Q6ZUA9 1318 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 EYA2O00167 538 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 FSTL1Q12841 308 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 MTX1Q13505 466 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 ITPRIPQ8IWB1 547 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 CNOT7Q9UIV1 285 aaKnown RBP22.3■■□□□ 1.16
SMN1-204ENST00000506163 HDAC5Q9UQL6 1122 aa22.3■■□□□ 1.16
SMN1-204ENST00000506163 ADAMTSL1Q8N6G6 1762 aa22.29■■□□□ 1.16
SMN1-204ENST00000506163 GNAI2P04899 355 aa22.29■■□□□ 1.16
SMN1-204ENST00000506163 LMOD1P29536 600 aaPredicted RBP22.29■■□□□ 1.16
SMN1-204ENST00000506163 MXD3Q9BW11 206 aa22.29■■□□□ 1.16
SMN1-204ENST00000506163 CD209Q9NNX6 404 aa22.29■■□□□ 1.16
SMN1-204ENST00000506163 HIRAP54198 1017 aaPredicted RBP22.28■■□□□ 1.16
SMN1-204ENST00000506163 UBE4AQ14139 1066 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 METTL24Q5JXM2 366 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 CHADLQ6NUI6 762 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 DPF2Q92785 391 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 GMLQ99445 158 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 SIL1Q9H173 461 aa22.28■■□□□ 1.16
SMN1-204ENST00000506163 PSME4Q14997 1843 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 PNMA6EA0A0J9YXQ4 647 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 USP17L3A6NCW0 530 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 USP17L4A6NCW7 530 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 PDE8BO95263 885 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 EGFRP00533 1210 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 HSPA6P17066 643 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 USP17L1Q7RTZ2 530 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 PNMA8AQ86V59 439 aaPredicted RBP22.27■■□□□ 1.16
SMN1-204ENST00000506163 MICALL2Q8IY33 904 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 C1orf115Q9H7X2 142 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
SMN1-204ENST00000506163 ZNF646O15015 1829 aaPredicted RBP22.27■■□□□ 1.15
SMN1-204ENST00000506163 SRGAP3O43295 1099 aa22.26■■□□□ 1.15
SMN1-204ENST00000506163 DACT2Q5SW24 774 aa22.26■■□□□ 1.15
SMN1-204ENST00000506163 C20orf194Q5TEA3 1177 aa22.26■■□□□ 1.15
SMN1-204ENST00000506163 RSBN1LQ6PCB5 846 aaPredicted RBP22.26■■□□□ 1.15
SMN1-204ENST00000506163 TRPM4Q8TD43 1214 aa22.26■■□□□ 1.15
SMN1-204ENST00000506163 FAM84BQ96KN1 310 aaPredicted RBP22.26■■□□□ 1.15
SMN1-204ENST00000506163 ADARB2Q9NS39 739 aaKnown RBP22.26■■□□□ 1.15
SMN1-204ENST00000506163 GYG1P46976 350 aa22.25■■□□□ 1.15
SMN1-204ENST00000506163 CIAO1O76071 339 aa22.24■■□□□ 1.15
SMN1-204ENST00000506163 FGFR2P21802 821 aa22.24■■□□□ 1.15
SMN1-204ENST00000506163 RPS12P25398 132 aaKnown RBP22.24■■□□□ 1.15
SMN1-204ENST00000506163 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
SMN1-204ENST00000506163 USP50Q70EL3 339 aaPredicted RBP22.24■■□□□ 1.15
SMN1-204ENST00000506163 SAMD7Q7Z3H4 446 aa22.24■■□□□ 1.15
SMN1-204ENST00000506163 CLEC11AQ9Y240 323 aa22.24■■□□□ 1.15
SMN1-204ENST00000506163 ITGBL1O95965 494 aaPredicted RBP22.23■■□□□ 1.15
SMN1-204ENST00000506163 IL1R1P14778 569 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 STRIP1Q5VSL9 837 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 AGBL3Q8NEM8 1001 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 FBXO3Q9UK99 471 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.23■■□□□ 1.15
SMN1-204ENST00000506163 CEP350Q5VT06 3117 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 GTF2IP78347 998 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 TTLL5Q6EMB2 1281 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 FBXO33Q7Z6M2 555 aa22.23■■□□□ 1.15
SMN1-204ENST00000506163 ZNF609O15014 1411 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 H7C1D1 291 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 HTRA3P83110 453 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 ATP8B2P98198 1209 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 POLA2Q14181 598 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 MVPQ14764 893 aaKnown RBP22.22■■□□□ 1.15
SMN1-204ENST00000506163 ZNF804AQ7Z570 1209 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 FBXW7Q969H0 707 aa22.22■■□□□ 1.15
SMN1-204ENST00000506163 ZNF280AP59817 542 aaPredicted RBP22.21■■□□□ 1.15
SMN1-204ENST00000506163 TBC1D10BQ4KMP7 808 aaPredicted RBP22.21■■□□□ 1.15
SMN1-204ENST00000506163 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
SMN1-204ENST00000506163 TDRD7Q8NHU6 1098 aaKnown RBP22.21■■□□□ 1.15
SMN1-204ENST00000506163 JAG2Q9Y219 1238 aa22.21■■□□□ 1.15
SMN1-204ENST00000506163 MS4A1P11836 297 aa22.2■■□□□ 1.14
SMN1-204ENST00000506163 HIBADHP31937 336 aaKnown RBP22.2■■□□□ 1.14
SMN1-204ENST00000506163 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.14
SMN1-204ENST00000506163 BCAMP50895 628 aa22.2■■□□□ 1.14
SMN1-204ENST00000506163 PUM3Q15397 648 aaKnown RBP22.2■■□□□ 1.14
SMN1-204ENST00000506163 CNTROBQ8N137 903 aa22.2■■□□□ 1.14
SMN1-204ENST00000506163 PGAP2Q9UHJ9 254 aa22.2■■□□□ 1.14
SMN1-204ENST00000506163 PASKQ96RG2 1323 aa22.2■■□□□ 1.14
SMN1-204ENST00000506163 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.14
SMN1-204ENST00000506163 RBM26Q5T8P6 1007 aaKnown RBP22.19■■□□□ 1.14
SMN1-204ENST00000506163 SSH3Q8TE77 659 aa22.19■■□□□ 1.14
SMN1-204ENST00000506163 CEP126Q9P2H0 1117 aa22.19■■□□□ 1.14
SMN1-204ENST00000506163 SASH1O94885 1247 aa22.18■■□□□ 1.14
SMN1-204ENST00000506163 USP17L8P0C7I0 530 aa22.18■■□□□ 1.14
SMN1-204ENST00000506163 IQSEC3Q9UPP2 1182 aaPredicted RBP22.18■■□□□ 1.14
SMN1-204ENST00000506163 ZBTB40Q9NUA8 1239 aa22.17■■□□□ 1.14
SMN1-204ENST00000506163 ASTN2O75129 1339 aaPredicted RBP22.17■■□□□ 1.14
SMN1-204ENST00000506163 TFCP2Q12800 502 aa22.16■■□□□ 1.14
SMN1-204ENST00000506163 PDE3AQ14432 1141 aa22.16■■□□□ 1.14
SMN1-204ENST00000506163 CEP85Q6P2H3 762 aa22.16■■□□□ 1.14
SMN1-204ENST00000506163 LPIN2Q92539 896 aa22.16■■□□□ 1.14
SMN1-204ENST00000506163 FAM205AQ6ZU69 1335 aa22.16■■□□□ 1.14
SMN1-204ENST00000506163 IFIT1P09914 478 aaKnown RBP22.15■■□□□ 1.14
SMN1-204ENST00000506163 APLP1P51693 650 aa22.15■■□□□ 1.14
SMN1-204ENST00000506163 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms