RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.35
HOXC6-203ENST00000504315 USP17L3A6NCW0 530 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 USP17L4A6NCW7 530 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 TRAF5O00463 557 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 KLRK1P26718 216 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 USP17L1Q7RTZ2 530 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
HOXC6-203ENST00000504315 MKRN1Q9UHC7 482 aaKnown RBP17.26■□□□□ 0.35
HOXC6-203ENST00000504315 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.35
HOXC6-203ENST00000504315 CST9Q5W186 159 aa17.25■□□□□ 0.35
HOXC6-203ENST00000504315 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
HOXC6-203ENST00000504315 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 TBC1D10BQ4KMP7 808 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-203ENST00000504315 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 CDC37L1Q7L3B6 337 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
HOXC6-203ENST00000504315 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-203ENST00000504315 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-203ENST00000504315 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
HOXC6-203ENST00000504315 TAF5LO75529 589 aa17.23■□□□□ 0.35
HOXC6-203ENST00000504315 KCNJ4P48050 445 aa17.23■□□□□ 0.35
HOXC6-203ENST00000504315 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
HOXC6-203ENST00000504315 SNAP23O00161 211 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 VEGFBP49765 207 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 TLL2Q9Y6L7 1015 aa17.22■□□□□ 0.35
HOXC6-203ENST00000504315 MMP14P50281 582 aa17.21■□□□□ 0.35
HOXC6-203ENST00000504315 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
HOXC6-203ENST00000504315 HELBQ8NG08 1087 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-203ENST00000504315 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
HOXC6-203ENST00000504315 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
HOXC6-203ENST00000504315 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
HOXC6-203ENST00000504315 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.35
HOXC6-203ENST00000504315 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
HOXC6-203ENST00000504315 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
HOXC6-203ENST00000504315 HSPA1AP0DMV8 641 aaKnown RBP17.2■□□□□ 0.34
HOXC6-203ENST00000504315 HSPA1BP0DMV9 641 aaKnown RBP17.2■□□□□ 0.34
HOXC6-203ENST00000504315 IL1R1P14778 569 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 UBE4AQ14139 1066 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 HHIPL1Q96JK4 782 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
HOXC6-203ENST00000504315 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
HOXC6-203ENST00000504315 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
HOXC6-203ENST00000504315 KRT26Q7Z3Y9 468 aa17.19■□□□□ 0.34
HOXC6-203ENST00000504315 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
HOXC6-203ENST00000504315 PUS3Q9BZE2 481 aaKnown RBP17.19■□□□□ 0.34
HOXC6-203ENST00000504315 GGA3Q9NZ52 723 aa17.19■□□□□ 0.34
HOXC6-203ENST00000504315 MROH5Q6ZUA9 1318 aa17.19■□□□□ 0.34
HOXC6-203ENST00000504315 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
HOXC6-203ENST00000504315 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
HOXC6-203ENST00000504315 USP48Q86UV5 1035 aa17.18■□□□□ 0.34
HOXC6-203ENST00000504315 DCPSQ96C86 337 aaKnown RBP17.18■□□□□ 0.34
HOXC6-203ENST00000504315 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
HOXC6-203ENST00000504315 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-203ENST00000504315 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
HOXC6-203ENST00000504315 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
HOXC6-203ENST00000504315 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
HOXC6-203ENST00000504315 GTF2IP78347 998 aa17.17■□□□□ 0.34
HOXC6-203ENST00000504315 SCARF1Q14162 830 aa17.17■□□□□ 0.34
HOXC6-203ENST00000504315 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
HOXC6-203ENST00000504315 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
HOXC6-203ENST00000504315 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
HOXC6-203ENST00000504315 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
HOXC6-203ENST00000504315 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
HOXC6-203ENST00000504315 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
HOXC6-203ENST00000504315 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
HOXC6-203ENST00000504315 WNT10BO00744 389 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 PLIN1O60240 522 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 ECE1P42892 770 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 LRRC24Q50LG9 513 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 ANGEL2Q5VTE6 544 aaKnown RBP17.15■□□□□ 0.34
HOXC6-203ENST00000504315 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 CERS5Q8N5B7 392 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-203ENST00000504315 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
HOXC6-203ENST00000504315 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-203ENST00000504315 TDRD7Q8NHU6 1098 aaKnown RBP17.14■□□□□ 0.33
HOXC6-203ENST00000504315 KLHDC4Q8TBB5 520 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 FAM84BQ96KN1 310 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-203ENST00000504315 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 WBP1LQ9NX94 342 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
HOXC6-203ENST00000504315 SASH1O94885 1247 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 PDE8BO95263 885 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 TRIM27P14373 513 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
HOXC6-203ENST00000504315 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms