RNA–Protein interactions for RNA: ENST00000503350.6

CSNK1A1-203, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2

Gene CSNK1A1, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-203ENST00000503350 CLN3Q13286 438 aa12.68□□□□□ -0.38
CSNK1A1-203ENST00000503350 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
CSNK1A1-203ENST00000503350 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-203ENST00000503350 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
CSNK1A1-203ENST00000503350 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-203ENST00000503350 ABCC6O95255 1503 aa12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 MEN1O00255 615 aa12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-203ENST00000503350 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
CSNK1A1-203ENST00000503350 LORP23490 312 aaPredicted RBP12.66□□□□□ -0.38
CSNK1A1-203ENST00000503350 SOX11P35716 441 aa12.66□□□□□ -0.38
CSNK1A1-203ENST00000503350 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-203ENST00000503350 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
CSNK1A1-203ENST00000503350 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 BCAR3O75815 825 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 GNRH1P01148 92 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 PHTF2Q8N3S3 785 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-203ENST00000503350 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 RNF135Q8IUD6 432 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
CSNK1A1-203ENST00000503350 PKD1L3Q7Z443 1732 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 GNAI1P63096 354 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
CSNK1A1-203ENST00000503350 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-203ENST00000503350 MCM10Q7L590 875 aa12.62□□□□□ -0.39
CSNK1A1-203ENST00000503350 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CSNK1A1-203ENST00000503350 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
CSNK1A1-203ENST00000503350 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CSNK1A1-203ENST00000503350 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 BCL2L13Q9BXK5 485 aa12.61□□□□□ -0.39
CSNK1A1-203ENST00000503350 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 FLIIQ13045 1269 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 USP4Q13107 963 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 SV2AQ7L0J3 742 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 KAT6BQ8WYB5 2073 aa12.6□□□□□ -0.39
CSNK1A1-203ENST00000503350 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 CPDO75976 1380 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 CDC14CA4D256 554 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 FRAT1Q92837 279 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 CRB1P82279 1406 aa12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-203ENST00000503350 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 RHOQP17081 205 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
CSNK1A1-203ENST00000503350 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 KRT76Q01546 638 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 VWA5B2Q8N398 1253 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
CSNK1A1-203ENST00000503350 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-203ENST00000503350 IL2RAP01589 272 aa12.56□□□□□ -0.4
CSNK1A1-203ENST00000503350 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-203ENST00000503350 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms