RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SALL3Q9BXA9 1300 aa25.02■■□□□ 1.6
CDC42SE2-206ENST00000503291 C6orf229H3BNL8 230 aa25.02■■□□□ 1.6
CDC42SE2-206ENST00000503291 MX1P20591 662 aa25.02■■□□□ 1.6
CDC42SE2-206ENST00000503291 CCDC93Q567U6 631 aa25.01■■□□□ 1.59
CDC42SE2-206ENST00000503291 PDE1AP54750 535 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 GORABQ5T7V8 394 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 LTBP1Q14766 1721 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 KLRK1P26718 216 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 GRIPAP1Q4V328 841 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 SOGA3Q5TF21 947 aa25■■□□□ 1.59
CDC42SE2-206ENST00000503291 GPR101Q96P66 508 aaPredicted RBP25■■□□□ 1.59
CDC42SE2-206ENST00000503291 SNED1Q8TER0 1413 aa24.99■■□□□ 1.59
CDC42SE2-206ENST00000503291 TSHZ3Q63HK5 1081 aa24.99■■□□□ 1.59
CDC42SE2-206ENST00000503291 RTKN2Q8IZC4 609 aa24.99■■□□□ 1.59
CDC42SE2-206ENST00000503291 STAP2Q9UGK3 403 aa24.99■■□□□ 1.59
CDC42SE2-206ENST00000503291 TXNRD3Q86VQ6 643 aa24.98■■□□□ 1.59
CDC42SE2-206ENST00000503291 ECHDC1Q9NTX5 307 aa24.98■■□□□ 1.59
CDC42SE2-206ENST00000503291 GPATCH3Q96I76 525 aa24.98■■□□□ 1.59
CDC42SE2-206ENST00000503291 RTFDC1Q9BY42 306 aaPredicted RBP24.98■■□□□ 1.59
CDC42SE2-206ENST00000503291 IRS2Q9Y4H2 1338 aa24.97■■□□□ 1.59
CDC42SE2-206ENST00000503291 GYG1P46976 350 aa24.97■■□□□ 1.59
CDC42SE2-206ENST00000503291 CCDC158Q5M9N0 1113 aa24.97■■□□□ 1.59
CDC42SE2-206ENST00000503291 OSBPL3Q9H4L5 887 aa24.97■■□□□ 1.59
CDC42SE2-206ENST00000503291 DUOX1Q9NRD9 1551 aa24.97■■□□□ 1.59
CDC42SE2-206ENST00000503291 BCAMP50895 628 aa24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 CAVIN4Q5BKX8 364 aa24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 CCDC102BQ68D86 513 aa24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 C15orf52Q6ZUT6 534 aaKnown RBP24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 FAM84BQ96KN1 310 aaPredicted RBP24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 TTC41PQ6P2S7 1318 aa24.96■■□□□ 1.59
CDC42SE2-206ENST00000503291 PHKA1P46020 1223 aa24.95■■□□□ 1.58
CDC42SE2-206ENST00000503291 WASHC4Q2M389 1173 aa24.95■■□□□ 1.58
CDC42SE2-206ENST00000503291 ARAP2Q8WZ64 1704 aa24.95■■□□□ 1.58
CDC42SE2-206ENST00000503291 ZC3H12CQ9C0D7 883 aaKnown RBP24.95■■□□□ 1.58
CDC42SE2-206ENST00000503291 RIMBP2O15034 1052 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 TTC39AQ5SRH9 613 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 FBXO33Q7Z6M2 555 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 VPS37DQ86XT2 251 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 SUPT20HQ8NEM7 779 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 PI4K2BQ8TCG2 481 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 PSMD1Q99460 953 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 EYA3Q99504 573 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 MED23Q9ULK4 1368 aa24.94■■□□□ 1.58
CDC42SE2-206ENST00000503291 ATP5JP18859 108 aa24.93■■□□□ 1.58
CDC42SE2-206ENST00000503291 HIBADHP31937 336 aaKnown RBP24.93■■□□□ 1.58
CDC42SE2-206ENST00000503291 ARFGEF1Q9Y6D6 1849 aa24.93■■□□□ 1.58
CDC42SE2-206ENST00000503291 ERC2O15083 957 aa24.93■■□□□ 1.58
CDC42SE2-206ENST00000503291 FKBP4Q02790 459 aaKnown RBP eCLIP24.92■■□□□ 1.58
CDC42SE2-206ENST00000503291 AOX1Q06278 1338 aa24.92■■□□□ 1.58
CDC42SE2-206ENST00000503291 GLRX3O76003 335 aaKnown RBP24.91■■□□□ 1.58
CDC42SE2-206ENST00000503291 BOLA2Q9H3K6 86 aa24.91■■□□□ 1.58
CDC42SE2-206ENST00000503291 ZNF512BQ96KM6 892 aaPredicted RBP24.91■■□□□ 1.58
CDC42SE2-206ENST00000503291 UQCRFS1P1P0C7P4 283 aa24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 ZNF804AQ7Z570 1209 aa24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 PELP1Q8IZL8 1130 aaKnown RBP24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 GNL3LQ9NVN8 582 aaKnown RBP24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 NFKBIEO00221 500 aa24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 ARID4AP29374 1257 aaPredicted RBP24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 TAOK3Q9H2K8 898 aa24.9■■□□□ 1.58
CDC42SE2-206ENST00000503291 FER1L6Q2WGJ9 1857 aa24.89■■□□□ 1.58
CDC42SE2-206ENST00000503291 SCARF1Q14162 830 aa24.89■■□□□ 1.57
CDC42SE2-206ENST00000503291 TTC22Q5TAA0 569 aa24.89■■□□□ 1.57
CDC42SE2-206ENST00000503291 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.57
CDC42SE2-206ENST00000503291 IQSEC3Q9UPP2 1182 aaPredicted RBP24.89■■□□□ 1.57
CDC42SE2-206ENST00000503291 YBX3P16989 372 aaKnown RBP eCLIP24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 AOC3Q16853 763 aa24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 CD209Q9NNX6 404 aa24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 MCAMP43121 646 aa24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 KIAA2012Q0VF49 1180 aa24.88■■□□□ 1.57
CDC42SE2-206ENST00000503291 PPIP5K2O43314 1243 aa24.87■■□□□ 1.57
CDC42SE2-206ENST00000503291 GSPT1P15170 499 aaKnown RBP24.87■■□□□ 1.57
CDC42SE2-206ENST00000503291 RASGRF1Q13972 1273 aa24.87■■□□□ 1.57
CDC42SE2-206ENST00000503291 COA1Q9GZY4 146 aa24.87■■□□□ 1.57
CDC42SE2-206ENST00000503291 DOK7Q18PE1 504 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 ARHGAP27Q6ZUM4 889 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 TDRD7Q8NHU6 1098 aaKnown RBP24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 HAUS7Q99871 368 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 SNRKQ9NRH2 765 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 NDUFB9Q9Y6M9 179 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 G3V3G9 751 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 FRAT2O75474 233 aaPredicted RBP24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 DCAF8Q5TAQ9 597 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 PI16Q6UXB8 463 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 VPS33BQ9H267 617 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 HMG20BQ9P0W2 317 aa24.86■■□□□ 1.57
CDC42SE2-206ENST00000503291 LTBP3Q9NS15 1303 aa24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 MAP4K4O95819 1239 aaPredicted RBP24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 IL1R1P14778 569 aa24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 SPATA5Q8NB90 893 aa24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 DNAJC2Q99543 621 aaKnown RBP24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 UTRNP46939 3433 aa24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 DBNDD1Q9H9R9 158 aa24.85■■□□□ 1.57
CDC42SE2-206ENST00000503291 SEMA3EO15041 775 aa24.84■■□□□ 1.57
CDC42SE2-206ENST00000503291 IARSP41252 1262 aaKnown RBP24.84■■□□□ 1.57
CDC42SE2-206ENST00000503291 BMP2KLQ5H9B9 411 aa24.84■■□□□ 1.57
CDC42SE2-206ENST00000503291 LARGE2Q8N3Y3 721 aa24.84■■□□□ 1.57
CDC42SE2-206ENST00000503291 DENND2AQ9ULE3 1009 aa24.84■■□□□ 1.57
CDC42SE2-206ENST00000503291 ZAP70P43403 619 aa24.83■■□□□ 1.57
CDC42SE2-206ENST00000503291 RASSF7Q02833 373 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms