RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 KRT23Q9C075 422 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 CSF1RP07333 972 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 CERS3Q8IU89 383 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 NUP62CLQ9H1M0 184 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 CLEC4GQ6UXB4 293 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 USP48Q86UV5 1035 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 FBXL16Q8N461 479 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 BICD2Q8TD16 824 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 TNS2Q63HR2 1409 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 PCP11498 1178 aaKnown RBP8.66□□□□□ -1.02
PDGFC-203ENST00000502773 CTSWP56202 376 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 BRAPQ7Z569 592 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 PFKFB2O60825 505 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC178Q5BJE1 867 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 A0A0G2JS52 829 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 PRAMEF22A3QJZ6 481 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 CASP7P55210 303 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 AKAP17AQ02040 695 aaKnown RBP8.66□□□□□ -1.02
PDGFC-203ENST00000502773 PTH1RQ03431 593 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 FOXD4L5Q5VV16 416 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-203ENST00000502773 DNAJC10Q8IXB1 793 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 FOXD4L4Q8WXT5 416 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-203ENST00000502773 DDX17Q92841 729 aaKnown RBP8.66□□□□□ -1.02
PDGFC-203ENST00000502773 GTF3C6Q969F1 213 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 KAZALD1Q96I82 304 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 FAM227BQ96M60 508 aa8.66□□□□□ -1.02
PDGFC-203ENST00000502773 PLCB2Q00722 1185 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 TNMDQ9H2S6 317 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-203ENST00000502773 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 FIBPO43427 364 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 KINO60870 393 aaKnown RBP8.65□□□□□ -1.02
PDGFC-203ENST00000502773 TERF1P54274 439 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 NBPF10Q6P3W6 841 aaKnown RBP8.65□□□□□ -1.02
PDGFC-203ENST00000502773 Q6ZUG5 572 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 DDX46Q7L014 1031 aaKnown RBP8.65□□□□□ -1.02
PDGFC-203ENST00000502773 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 NBPF15Q8N660 670 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 AK9Q5TCS8 1911 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 RASEFQ8IZ41 740 aa8.65□□□□□ -1.02
PDGFC-203ENST00000502773 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-203ENST00000502773 COL18A1P39060 1754 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 SPEF2Q9C093 1822 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 SEMA3EO15041 775 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 NPHP1O15259 732 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 ITGA6P23229 1130 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 SPTY2D1Q68D10 685 aaPredicted RBP8.65□□□□□ -1.03
PDGFC-203ENST00000502773 BARGINQ6ZT62 677 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 LRP10Q7Z4F1 713 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 CNPY4Q8N129 248 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 ANKRD2Q9GZV1 360 aa8.65□□□□□ -1.03
PDGFC-203ENST00000502773 SYCE3A1L190 88 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 RCAN1P53805 252 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 NLRP10Q86W26 655 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 KCNG4Q8TDN1 519 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 PIGBQ92521 554 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 NEMFO60524 1076 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-203ENST00000502773 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 MTMR6Q9Y217 621 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
PDGFC-203ENST00000502773 JCADQ9P266 1359 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 CBX1P83916 185 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 ALX1Q15699 326 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 EPHA10Q5JZY3 1008 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 NFXL1Q6ZNB6 911 aa8.64□□□□□ -1.03
PDGFC-203ENST00000502773 PDE8BO95263 885 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 CYP19A1P11511 503 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ME3Q16798 604 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
PDGFC-203ENST00000502773 LRP6O75581 1613 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ZMYM6O95789 1325 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 CCDC69A6NI79 296 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 BECN2A8MW95 431 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 BMP15O95972 392 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 BRF1Q92994 677 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 PYM1Q9BRP8 204 aaKnown RBP8.63□□□□□ -1.03
PDGFC-203ENST00000502773 NAPBQ9H115 298 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ZNF287Q9HBT7 754 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 ZNF609O15014 1411 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 HSPD1P10809 573 aaKnown RBP8.63□□□□□ -1.03
PDGFC-203ENST00000502773 FAM193AP78312 1265 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
PDGFC-203ENST00000502773 TMX4Q9H1E5 349 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-203ENST00000502773 CALM1P0DP23 149 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms