RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 UBE3CQ15386 1083 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 CCDC57Q2TAC2 916 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 APPBP2Q92624 585 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 SCAND2PQ9GZW5 306 aaPredicted RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
LINC00461-201ENST00000500197 SBF2Q86WG5 1849 aa11.69□□□□□ -0.54
LINC00461-201ENST00000500197 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
LINC00461-201ENST00000500197 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
LINC00461-201ENST00000500197 IFIT1P09914 478 aaKnown RBP11.68□□□□□ -0.54
LINC00461-201ENST00000500197 CPA1P15085 419 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 CACNA1SQ13698 1873 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
LINC00461-201ENST00000500197 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
LINC00461-201ENST00000500197 ZSCAN30Q86W11 494 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 CNPY2Q9Y2B0 182 aa11.68□□□□□ -0.54
LINC00461-201ENST00000500197 BTAF1O14981 1849 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 COL9A3Q14050 684 aaPredicted RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 PARP10Q53GL7 1025 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 PDS5AQ29RF7 1337 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 IFIT5Q13325 482 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 UBN2Q6ZU65 1347 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 E7EWF7 191 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 M0R2C6 588 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 KRT85P78386 507 aa11.67□□□□□ -0.54
LINC00461-201ENST00000500197 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
LINC00461-201ENST00000500197 SYCE3A1L190 88 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
LINC00461-201ENST00000500197 PUS3Q9BZE2 481 aaKnown RBP11.66□□□□□ -0.54
LINC00461-201ENST00000500197 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
LINC00461-201ENST00000500197 EXOC5O00471 708 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 ADD2P35612 726 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 Q6ZUG5 572 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
LINC00461-201ENST00000500197 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
LINC00461-201ENST00000500197 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 GOLIM4O00461 696 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 PDE8BO95263 885 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 CAVIN2O95810 425 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 RCAN1P53805 252 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 SCRN1Q12765 414 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 HLFQ16534 295 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 LARP1BQ659C4 914 aaKnown RBP11.65□□□□□ -0.54
LINC00461-201ENST00000500197 CDC37L1Q7L3B6 337 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 ANP32BQ92688 251 aaKnown RBP11.65□□□□□ -0.54
LINC00461-201ENST00000500197 OSBP2Q969R2 916 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 KCNJ4P48050 445 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
LINC00461-201ENST00000500197 KIF3AQ9Y496 699 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 TIMM10P62072 90 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.54
LINC00461-201ENST00000500197 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
LINC00461-201ENST00000500197 STRN4Q9NRL3 753 aa11.65□□□□□ -0.54
LINC00461-201ENST00000500197 LRRC37AA6NMS7 1700 aa11.65□□□□□ -0.55
LINC00461-201ENST00000500197 COL4A1P02462 1669 aa11.65□□□□□ -0.55
LINC00461-201ENST00000500197 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 USP25Q9UHP3 1055 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 ITGA6P23229 1130 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 ATP2B3Q16720 1220 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 LPIN2Q92539 896 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 PUM3Q15397 648 aaKnown RBP11.64□□□□□ -0.55
LINC00461-201ENST00000500197 TTC39AQ5SRH9 613 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
LINC00461-201ENST00000500197 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
LINC00461-201ENST00000500197 CCDC87Q9NVE4 849 aa11.63□□□□□ -0.55
LINC00461-201ENST00000500197 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
LINC00461-201ENST00000500197 PDIA3P30101 505 aaKnown RBP11.63□□□□□ -0.55
LINC00461-201ENST00000500197 ADORA1P30542 326 aa11.63□□□□□ -0.55
LINC00461-201ENST00000500197 MCAMP43121 646 aa11.63□□□□□ -0.55
LINC00461-201ENST00000500197 NT5C2P49902 561 aa11.63□□□□□ -0.55
LINC00461-201ENST00000500197 NECAB1Q8N987 351 aa11.63□□□□□ -0.55
LINC00461-201ENST00000500197 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms