RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 RSBN1LQ6PCB5 846 aaPredicted RBP23.48■■□□□ 1.35
RPN1-208ENST00000497415 USP17L1Q7RTZ2 530 aa23.48■■□□□ 1.35
RPN1-208ENST00000497415 AGBL3Q8NEM8 1001 aa23.48■■□□□ 1.35
RPN1-208ENST00000497415 TRPM4Q8TD43 1214 aa23.48■■□□□ 1.35
RPN1-208ENST00000497415 CREBZFQ9NS37 354 aa23.48■■□□□ 1.35
RPN1-208ENST00000497415 SNAP23O00161 211 aa23.47■■□□□ 1.35
RPN1-208ENST00000497415 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
RPN1-208ENST00000497415 KCNJ4P48050 445 aa23.47■■□□□ 1.35
RPN1-208ENST00000497415 INTS3Q68E01 1043 aaKnown RBP23.47■■□□□ 1.35
RPN1-208ENST00000497415 ZC3H15Q8WU90 426 aaKnown RBP23.47■■□□□ 1.35
RPN1-208ENST00000497415 KLRG1Q96E93 195 aa23.47■■□□□ 1.35
RPN1-208ENST00000497415 GMLQ99445 158 aa23.47■■□□□ 1.35
RPN1-208ENST00000497415 PUS3Q9BZE2 481 aaKnown RBP23.47■■□□□ 1.35
RPN1-208ENST00000497415 RIPOR2Q9Y4F9 1068 aa23.46■■□□□ 1.35
RPN1-208ENST00000497415 UBTFL1P0CB47 393 aaPredicted RBP23.45■■□□□ 1.34
RPN1-208ENST00000497415 SAMD7Q7Z3H4 446 aa23.45■■□□□ 1.34
RPN1-208ENST00000497415 TRIM27P14373 513 aa23.44■■□□□ 1.34
RPN1-208ENST00000497415 STRIP1Q5VSL9 837 aa23.44■■□□□ 1.34
RPN1-208ENST00000497415 ATF7IPQ6VMQ6 1270 aa23.44■■□□□ 1.34
RPN1-208ENST00000497415 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 PLIN1O60240 522 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 RFX5P48382 616 aaPredicted RBP23.43■■□□□ 1.34
RPN1-208ENST00000497415 ZNF280AP59817 542 aaPredicted RBP23.43■■□□□ 1.34
RPN1-208ENST00000497415 UBE4AQ14139 1066 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 DACT2Q5SW24 774 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 CD209Q9NNX6 404 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
RPN1-208ENST00000497415 TMEM88BA6NKF7 163 aa23.42■■□□□ 1.34
RPN1-208ENST00000497415 EGFRP00533 1210 aa23.42■■□□□ 1.34
RPN1-208ENST00000497415 TBC1D10BQ4KMP7 808 aaPredicted RBP23.42■■□□□ 1.34
RPN1-208ENST00000497415 LRRC24Q50LG9 513 aa23.42■■□□□ 1.34
RPN1-208ENST00000497415 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
RPN1-208ENST00000497415 TRPM7Q96QT4 1865 aa23.42■■□□□ 1.34
RPN1-208ENST00000497415 MEIS3Q99687 375 aa23.41■■□□□ 1.34
RPN1-208ENST00000497415 TNNQ9UQP3 1299 aa23.41■■□□□ 1.34
RPN1-208ENST00000497415 MYO3BQ8WXR4 1341 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 POLR2AP24928 1970 aaKnown RBP23.4■■□□□ 1.34
RPN1-208ENST00000497415 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 IL1R1P14778 569 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 KIF4BQ2VIQ3 1234 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 ZKSCAN2Q63HK3 967 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 TTLL5Q6EMB2 1281 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 ZNF804AQ7Z570 1209 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 JMYQ8N9B5 988 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
RPN1-208ENST00000497415 LRRFIP2Q9Y608 721 aaKnown RBP23.4■■□□□ 1.34
RPN1-208ENST00000497415 PTPN12Q05209 780 aaKnown RBP23.39■■□□□ 1.33
RPN1-208ENST00000497415 FMR1Q06787 632 aaKnown RBP eCLIP23.39■■□□□ 1.331e-9■■□□□ 11.8
RPN1-208ENST00000497415 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
RPN1-208ENST00000497415 MXD3Q9BW11 206 aa23.39■■□□□ 1.33
RPN1-208ENST00000497415 TRAF5O00463 557 aa23.38■■□□□ 1.33
RPN1-208ENST00000497415 GNAI3P08754 354 aa23.38■■□□□ 1.33
RPN1-208ENST00000497415 GTF2IP78347 998 aa23.38■■□□□ 1.33
RPN1-208ENST00000497415 CDC37L1Q7L3B6 337 aa23.38■■□□□ 1.33
RPN1-208ENST00000497415 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
RPN1-208ENST00000497415 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
RPN1-208ENST00000497415 PDE8BO95263 885 aa23.37■■□□□ 1.33
RPN1-208ENST00000497415 METTL24Q5JXM2 366 aa23.37■■□□□ 1.33
RPN1-208ENST00000497415 FBXW7Q969H0 707 aa23.37■■□□□ 1.33
RPN1-208ENST00000497415 EYA2O00167 538 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 MMP14P50281 582 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 CST9Q5W186 159 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 CLUAP1Q96AJ1 413 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 MYOZ2Q9NPC6 264 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 FBXO3Q9UK99 471 aa23.36■■□□□ 1.33
RPN1-208ENST00000497415 FAM84BQ96KN1 310 aaPredicted RBP23.35■■□□□ 1.33
RPN1-208ENST00000497415 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
RPN1-208ENST00000497415 FKBP1AP62942 108 aaKnown RBP23.34■■□□□ 1.33
RPN1-208ENST00000497415 ATG9AQ7Z3C6 839 aa23.34■■□□□ 1.33
RPN1-208ENST00000497415 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
RPN1-208ENST00000497415 MKRN1Q9UHC7 482 aaKnown RBP23.34■■□□□ 1.33
RPN1-208ENST00000497415 SASH1O94885 1247 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 HIBADHP31937 336 aaKnown RBP23.33■■□□□ 1.33
RPN1-208ENST00000497415 GYG1P46976 350 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 MTX1Q13505 466 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 SCARF1Q14162 830 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 USP48Q86UV5 1035 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 TMEM57Q8N5G2 664 aa23.33■■□□□ 1.33
RPN1-208ENST00000497415 DCPSQ96C86 337 aaKnown RBP23.33■■□□□ 1.33
RPN1-208ENST00000497415 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.32
RPN1-208ENST00000497415 RASSF10A6NK89 507 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 CIAO1O76071 339 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 FGFR2P21802 821 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 KRT26Q7Z3Y9 468 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 FBXO33Q7Z6M2 555 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 CERS5Q8N5B7 392 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 COPRSQ9NQ92 184 aa23.32■■□□□ 1.32
RPN1-208ENST00000497415 ASTN2O75129 1339 aaPredicted RBP23.32■■□□□ 1.32
RPN1-208ENST00000497415 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
RPN1-208ENST00000497415 CELF2O95319 508 aaKnown RBP23.3■■□□□ 1.32
RPN1-208ENST00000497415 PUM3Q15397 648 aaKnown RBP23.3■■□□□ 1.32
RPN1-208ENST00000497415 DEFB115Q30KQ5 88 aa23.3■■□□□ 1.32
RPN1-208ENST00000497415 KIAA0825Q8IV33 1275 aa23.3■■□□□ 1.32
RPN1-208ENST00000497415 ABT1Q9ULW3 272 aaKnown RBP23.3■■□□□ 1.32
RPN1-208ENST00000497415 PITPNM2Q9BZ72 1349 aa23.3■■□□□ 1.32
RPN1-208ENST00000497415 GNAI2P04899 355 aa23.29■■□□□ 1.32
RPN1-208ENST00000497415 ANGEL2Q5VTE6 544 aaKnown RBP23.29■■□□□ 1.32
RPN1-208ENST00000497415 DZIP1LQ8IYY4 767 aaKnown RBP23.29■■□□□ 1.32
RPN1-208ENST00000497415 HDAC9Q9UKV0 1011 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms