RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 RXRAP19793 462 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
CDCA7-208ENST00000496441 ATP2B3Q16720 1220 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 HELLSQ9NRZ9 838 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 SH3TC1Q8TE82 1336 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 AP5Z1O43299 807 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 ARID3AQ99856 593 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
CDCA7-208ENST00000496441 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 FGAP02671 866 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
CDCA7-208ENST00000496441 CCDC192P0DO97 292 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
CDCA7-208ENST00000496441 GLI3P10071 1580 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 XIRP1Q702N8 1843 aaKnown RBP13.59□□□□□ -0.23
CDCA7-208ENST00000496441 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
CDCA7-208ENST00000496441 SLC9C2Q5TAH2 1124 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
CDCA7-208ENST00000496441 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
CDCA7-208ENST00000496441 INCENPQ9NQS7 918 aa13.59□□□□□ -0.23
CDCA7-208ENST00000496441 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
CDCA7-208ENST00000496441 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
CDCA7-208ENST00000496441 MCAMP43121 646 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 TTLL11Q8NHH1 800 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
CDCA7-208ENST00000496441 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
CDCA7-208ENST00000496441 DSCC1Q9BVC3 393 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
CDCA7-208ENST00000496441 JCADQ9P266 1359 aa13.58□□□□□ -0.24
CDCA7-208ENST00000496441 EXOC5O00471 708 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 GPAA1O43292 621 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 CIAO1O76071 339 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 KCNQ4P56696 695 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 TYRO3Q06418 890 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 RESTQ13127 1097 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 PFKFB2O60825 505 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 OFD1O75665 1012 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 PHKA1P46020 1223 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
CDCA7-208ENST00000496441 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
CDCA7-208ENST00000496441 LAMB4A4D0S4 1761 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 PRC1O43663 620 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
CDCA7-208ENST00000496441 ME1P48163 572 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
CDCA7-208ENST00000496441 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 NKX2-3Q8TAU0 364 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 FOXP2O15409 715 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
CDCA7-208ENST00000496441 CTSWP56202 376 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
CDCA7-208ENST00000496441 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 USP28Q96RU2 1077 aa13.56□□□□□ -0.24
CDCA7-208ENST00000496441 ZNF213O14771 459 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 HS1BP3Q53T59 392 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
CDCA7-208ENST00000496441 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 TJP1Q07157 1748 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 CPLX1O14810 134 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
CDCA7-208ENST00000496441 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
CDCA7-208ENST00000496441 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 SASS6Q6UVJ0 657 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
CDCA7-208ENST00000496441 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 KDM4FA0A1W2PPD8 638 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 CCAR1Q8IX12 1150 aaKnown RBP13.54□□□□□ -0.24
CDCA7-208ENST00000496441 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
CDCA7-208ENST00000496441 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
CDCA7-208ENST00000496441 APPBP2Q92624 585 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 AIFM3Q96NN9 605 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
CDCA7-208ENST00000496441 CFAP45Q9UL16 551 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms