RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 AGXT2Q9BYV1 514 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 ZSCAN16Q9H4T2 348 aaPredicted RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 JAK2O60674 1132 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
CMSS1-208ENST00000496116 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 LRRC2Q9BYS8 371 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
CMSS1-208ENST00000496116 GREM2Q9H772 168 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 CCDC39Q9UFE4 941 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 ROBO1Q9Y6N7 1651 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 NUP98P52948 1817 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 PDE8AO60658 829 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
CMSS1-208ENST00000496116 ZSCAN25Q6NSZ9 544 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
CMSS1-208ENST00000496116 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 SPATA32Q96LK8 384 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
CMSS1-208ENST00000496116 RIC1Q4ADV7 1423 aa13.07□□□□□ -0.32
CMSS1-208ENST00000496116 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-208ENST00000496116 MYH7P12883 1935 aa13.06□□□□□ -0.32
CMSS1-208ENST00000496116 ZAP70P43403 619 aa13.06□□□□□ -0.32
CMSS1-208ENST00000496116 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-208ENST00000496116 ZNF512BQ96KM6 892 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-208ENST00000496116 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-208ENST00000496116 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
CMSS1-208ENST00000496116 FBXL16Q8N461 479 aa13.06□□□□□ -0.32
CMSS1-208ENST00000496116 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-208ENST00000496116 CFAP45Q9UL16 551 aa13.06□□□□□ -0.32
CMSS1-208ENST00000496116 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
CMSS1-208ENST00000496116 MCM5P33992 734 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 AK7Q96M32 723 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
CMSS1-208ENST00000496116 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
CMSS1-208ENST00000496116 PDE8BO95263 885 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 SCARF1Q14162 830 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 NSUN7Q8NE18 718 aaKnown RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 RESTQ13127 1097 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 LEO1Q8WVC0 666 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 FUCA2Q9BTY2 467 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 NAP1L2Q9ULW6 460 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
CMSS1-208ENST00000496116 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
CMSS1-208ENST00000496116 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 MCAMP43121 646 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 ZNF34Q8IZ26 560 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 TFIP11Q9UBB9 837 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 ZKSCAN5Q9Y2L8 839 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 GPAA1O43292 621 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 FGAP02671 866 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 DDB1Q16531 1140 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 MAP3K11Q16584 847 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
CMSS1-208ENST00000496116 DDX19AQ9NUU7 478 aaKnown RBP13.03□□□□□ -0.32
CMSS1-208ENST00000496116 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
CMSS1-208ENST00000496116 A0A0G2JLW4 131 aa13.02□□□□□ -0.33
CMSS1-208ENST00000496116 ZNF213O14771 459 aa13.02□□□□□ -0.33
CMSS1-208ENST00000496116 EVCP57679 992 aa13.02□□□□□ -0.33
CMSS1-208ENST00000496116 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.33
CMSS1-208ENST00000496116 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.33
CMSS1-208ENST00000496116 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
CMSS1-208ENST00000496116 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.33
CMSS1-208ENST00000496116 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
CMSS1-208ENST00000496116 ZNF500O60304 480 aaPredicted RBP13.01□□□□□ -0.33
CMSS1-208ENST00000496116 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 ADD2P35612 726 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 LPIN2Q92539 896 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms