RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 PSAPP07602 524 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 ACPPP15309 386 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 HFE2Q6ZVN8 426 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 BTBD6Q96KE9 485 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 NSUN5Q96P11 429 aaKnown RBP8.5□□□□□ -1.05
SRRM1-218ENST00000494934 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 PCDHGB7Q9Y5F8 929 aa8.5□□□□□ -1.05
SRRM1-218ENST00000494934 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 TNNI2P48788 182 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 ZNF394Q53GI3 561 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 ADAMTSL4Q6UY14 1074 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 CEP120Q8N960 986 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 TGIF2Q9GZN2 237 aa8.49□□□□□ -1.05
SRRM1-218ENST00000494934 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 NFKBIEO00221 500 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 SIK1P57059 783 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 TBC1D8BQ0IIM8 1120 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 COL9A3Q14050 684 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-218ENST00000494934 GRM2Q14416 872 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 PERM1Q5SV97 790 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-218ENST00000494934 CHSY3Q70JA7 882 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 ZSCAN1Q8NBB4 408 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 DRC1Q96MC2 740 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
SRRM1-218ENST00000494934 ALBP02768 609 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 CES1P23141 567 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
SRRM1-218ENST00000494934 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
SRRM1-218ENST00000494934 GRIK5Q16478 980 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 C8orf86Q6ZUL3 223 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 GLIS3Q8NEA6 775 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 FAM8A1Q9UBU6 413 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 USP31Q70CQ4 1352 aa8.47□□□□□ -1.05
SRRM1-218ENST00000494934 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-218ENST00000494934 CPB1P15086 417 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 MICALL1Q8N3F8 863 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
SRRM1-218ENST00000494934 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-218ENST00000494934 A0A1W2PP55 124 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 GIPC1O14908 333 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 DGKGP49619 791 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 ATP11AP98196 1134 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 HYAL2Q12891 473 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 C3orf58Q8NDZ4 430 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 CAPN10Q9HC96 672 aa8.45□□□□□ -1.06
SRRM1-218ENST00000494934 SRA1Q9HD15 236 aaKnown RBP8.45□□□□□ -1.06
SRRM1-218ENST00000494934 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
SRRM1-218ENST00000494934 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 TRPA1O75762 1119 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 SNRPNP63162 240 aaKnown RBP8.44□□□□□ -1.06
SRRM1-218ENST00000494934 PSAPL1Q6NUJ1 521 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 PMEPA1Q969W9 287 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 HHIPQ96QV1 700 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 SHROOM4Q9ULL8 1493 aa8.44□□□□□ -1.06
SRRM1-218ENST00000494934 INSM1Q01101 510 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-218ENST00000494934 TAF1CQ15572 869 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-218ENST00000494934 PCSK7Q16549 785 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 LINC00114Q6XXX2 140 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 USP48Q86UV5 1035 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 TTC9Q92623 222 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 ZKSCAN3Q9BRR0 538 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 RASSF4Q9H2L5 321 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 COPRSQ9NQ92 184 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 FRRS1LQ9P0K9 344 aa8.43□□□□□ -1.06
SRRM1-218ENST00000494934 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-218ENST00000494934 ALAS2P22557 587 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
SRRM1-218ENST00000494934 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 ERMP1Q7Z2K6 904 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 NUDT8Q8WV74 236 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 PLD4Q96BZ4 506 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
SRRM1-218ENST00000494934 ABCB6Q9NP58 842 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 GGT7Q9UJ14 662 aa8.42□□□□□ -1.06
SRRM1-218ENST00000494934 M0R082 166 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 EIF2AK2P19525 551 aaKnown RBP8.41□□□□□ -1.06
SRRM1-218ENST00000494934 ST13P50502 369 aaKnown RBP8.41□□□□□ -1.06
SRRM1-218ENST00000494934 MAP3K10Q02779 954 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 KANK3Q6NY19 840 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 NCAPG2Q86XI2 1143 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 ZNF417Q8TAU3 575 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 UBXN4Q92575 508 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 ZNF587Q96SQ5 575 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-218ENST00000494934 PBX4Q9BYU1 374 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 EHD4Q9H223 541 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
SRRM1-218ENST00000494934 NID1P14543 1247 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms