RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-245ENST00000494862 TM4SF1P30408 202 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDLBP-245ENST00000494862 CHRNDQ07001 517 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 MCMDC2Q4G0Z9 681 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 MAP4K1Q92918 833 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 HELLSQ9NRZ9 838 aa13.83□□□□□ -0.2
HDLBP-245ENST00000494862 NPHP1O15259 732 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 TAF5LO75529 589 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-245ENST00000494862 ZAP70P43403 619 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 MCM2P49736 904 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
HDLBP-245ENST00000494862 SCARF1Q14162 830 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 ZMYM1Q5SVZ6 1142 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 CNBD1Q8NA66 436 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
HDLBP-245ENST00000494862 SNX14Q9Y5W7 946 aa13.82□□□□□ -0.2
HDLBP-245ENST00000494862 MCAMP43121 646 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 PHKA1P46020 1223 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-245ENST00000494862 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-245ENST00000494862 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
HDLBP-245ENST00000494862 ANTXR1Q9H6X2 564 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
HDLBP-245ENST00000494862 SERPINB2P05120 415 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 KCNJ4P48050 445 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 NEK4P51957 841 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 ST5P78524 1137 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
HDLBP-245ENST00000494862 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 ANKRD2Q9GZV1 360 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 EP400Q96L91 3159 aa13.8□□□□□ -0.2
HDLBP-245ENST00000494862 ARAP2Q8WZ64 1704 aa13.79□□□□□ -0.2
HDLBP-245ENST00000494862 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
HDLBP-245ENST00000494862 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
HDLBP-245ENST00000494862 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
HDLBP-245ENST00000494862 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
HDLBP-245ENST00000494862 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.79□□□□□ -0.26e-9■■■□□ 16.4
HDLBP-245ENST00000494862 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-245ENST00000494862 SNAP23O00161 211 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 SLC27A2O14975 620 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 CHGBP05060 677 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-245ENST00000494862 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-245ENST00000494862 DDR1Q08345 913 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 GRAPQ13588 217 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 GRAPLQ8TC17 118 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-245ENST00000494862 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
HDLBP-245ENST00000494862 DSCC1Q9BVC3 393 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 COL4A1P02462 1669 aa13.78□□□□□ -0.2
HDLBP-245ENST00000494862 POLRMTO00411 1230 aaKnown RBP13.77□□□□□ -0.21
HDLBP-245ENST00000494862 MAST3O60307 1309 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 TSGA10IPQ3SY00 556 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 PI16Q6UXB8 463 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 COL23A1Q86Y22 540 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-245ENST00000494862 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-245ENST00000494862 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 APPBP2Q92624 585 aa13.77□□□□□ -0.21
HDLBP-245ENST00000494862 PIH1D3Q9NQM4 214 aaKnown RBP13.77□□□□□ -0.21
HDLBP-245ENST00000494862 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-245ENST00000494862 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
HDLBP-245ENST00000494862 ADD2P35612 726 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 DDIT3P35638 169 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 BCAMP50895 628 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
HDLBP-245ENST00000494862 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-245ENST00000494862 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
HDLBP-245ENST00000494862 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
HDLBP-245ENST00000494862 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
HDLBP-245ENST00000494862 M0R2C6 588 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 PSMA5P28066 241 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 SLFNL1Q499Z3 407 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
HDLBP-245ENST00000494862 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
HDLBP-245ENST00000494862 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
HDLBP-245ENST00000494862 TTC14Q96N46 770 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
HDLBP-245ENST00000494862 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
HDLBP-245ENST00000494862 AKAP11Q9UKA4 1901 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms