RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 ZNF594Q96JF6 807 aaPredicted RBP12.18□□□□□ -0.46
MSH5-218ENST00000494646 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
MSH5-218ENST00000494646 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 PSME4Q14997 1843 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 ZNF804BA4D1E1 1349 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
MSH5-218ENST00000494646 PLIN1O60240 522 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 KLRK1P26718 216 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 CHRNDQ07001 517 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 SLFN5Q08AF3 891 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
MSH5-218ENST00000494646 SCARF1Q14162 830 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
MSH5-218ENST00000494646 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
MSH5-218ENST00000494646 ADM5C9JUS6 153 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 E9PSI1 815 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 GRM8O00222 908 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 AOC2O75106 756 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 KCNJ4P48050 445 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 KIF4BQ2VIQ3 1234 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 AIDAQ96BJ3 306 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
MSH5-218ENST00000494646 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
MSH5-218ENST00000494646 CAPN15O75808 1086 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 ECE1P42892 770 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 CCDC57Q2TAC2 916 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 TTLL5Q6EMB2 1281 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 GMLQ99445 158 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 MYOZ2Q9NPC6 264 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
MSH5-218ENST00000494646 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
MSH5-218ENST00000494646 LBX1P52954 281 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
MSH5-218ENST00000494646 GTF2IP78347 998 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
MSH5-218ENST00000494646 DACT2Q5SW24 774 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
MSH5-218ENST00000494646 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
MSH5-218ENST00000494646 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
MSH5-218ENST00000494646 HUNKP57058 714 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 STRIP1Q5VSL9 837 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 SULF1Q8IWU6 871 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
MSH5-218ENST00000494646 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
MSH5-218ENST00000494646 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
MSH5-218ENST00000494646 C2orf69Q8N8R5 385 aa12.12□□□□□ -0.47
MSH5-218ENST00000494646 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
MSH5-218ENST00000494646 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 MAP2K2P36507 400 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
MSH5-218ENST00000494646 GBA2Q9HCG7 927 aaPredicted RBP12.11□□□□□ -0.47
MSH5-218ENST00000494646 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
MSH5-218ENST00000494646 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
MSH5-218ENST00000494646 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
MSH5-218ENST00000494646 TRMT2AQ8IZ69 625 aaKnown RBP12.1□□□□□ -0.47
MSH5-218ENST00000494646 HHIPL1Q96JK4 782 aa12.1□□□□□ -0.47
MSH5-218ENST00000494646 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
MSH5-218ENST00000494646 PTPRCP08575 1304 aa12.1□□□□□ -0.47
MSH5-218ENST00000494646 IRS2Q9Y4H2 1338 aa12.1□□□□□ -0.47
MSH5-218ENST00000494646 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 WNT10BO00744 389 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 SASH1O94885 1247 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
MSH5-218ENST00000494646 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 MOB2Q70IA6 237 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
MSH5-218ENST00000494646 UTYO14607 1347 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
MSH5-218ENST00000494646 ALDH1L2Q3SY69 923 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 LRRC24Q50LG9 513 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms