RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
HSPG2-212ENST00000493940 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
HSPG2-212ENST00000493940 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
HSPG2-212ENST00000493940 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
HSPG2-212ENST00000493940 ALDH1L2Q3SY69 923 aa15.97■□□□□ 0.15
HSPG2-212ENST00000493940 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-212ENST00000493940 USP48Q86UV5 1035 aa15.97■□□□□ 0.15
HSPG2-212ENST00000493940 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
HSPG2-212ENST00000493940 WBP1LQ9NX94 342 aa15.97■□□□□ 0.15
HSPG2-212ENST00000493940 LEMD3Q9Y2U8 911 aa15.97■□□□□ 0.15
HSPG2-212ENST00000493940 PTPRCP08575 1304 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 G3V3G9 751 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 RPS12P25398 132 aaKnown RBP15.96■□□□□ 0.15
HSPG2-212ENST00000493940 DACT2Q5SW24 774 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 AIDAQ96BJ3 306 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 NOB1Q9ULX3 412 aaKnown RBP15.96■□□□□ 0.15
HSPG2-212ENST00000493940 SCAF8Q9UPN6 1271 aaKnown RBP15.96■□□□□ 0.15
HSPG2-212ENST00000493940 TNNQ9UQP3 1299 aa15.96■□□□□ 0.15
HSPG2-212ENST00000493940 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 ZNF280AP59817 542 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-212ENST00000493940 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-212ENST00000493940 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 KLHDC4Q8TBB5 520 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
HSPG2-212ENST00000493940 ANKRD2Q9GZV1 360 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
HSPG2-212ENST00000493940 ZNF609O15014 1411 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 ADM5C9JUS6 153 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 PLIN1O60240 522 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
HSPG2-212ENST00000493940 CCDC57Q2TAC2 916 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 AGBL3Q8NEM8 1001 aa15.94■□□□□ 0.14
HSPG2-212ENST00000493940 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 DEFB115Q30KQ5 88 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 COA1Q9GZY4 146 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 CD209Q9NNX6 404 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
HSPG2-212ENST00000493940 CELF2O95319 508 aaKnown RBP15.92■□□□□ 0.14
HSPG2-212ENST00000493940 BRPF1P55201 1214 aaPredicted RBP15.92■□□□□ 0.14
HSPG2-212ENST00000493940 SCARF1Q14162 830 aa15.92■□□□□ 0.14
HSPG2-212ENST00000493940 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
HSPG2-212ENST00000493940 CDC37L1Q7L3B6 337 aa15.92■□□□□ 0.14
HSPG2-212ENST00000493940 CERS5Q8N5B7 392 aa15.92■□□□□ 0.14
HSPG2-212ENST00000493940 ABT1Q9ULW3 272 aaKnown RBP15.92■□□□□ 0.14
HSPG2-212ENST00000493940 THSD7BQ9C0I4 1608 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 BCAR3O75815 825 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 USP17L8P0C7I0 530 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 RFX5P48382 616 aaPredicted RBP15.91■□□□□ 0.14
HSPG2-212ENST00000493940 LBX1P52954 281 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 GTF2IP78347 998 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 NBPF9Q3BBW0 867 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 STRIP1Q5VSL9 837 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 TTLL5Q6EMB2 1281 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 CYP4F22Q6NT55 531 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 MYOZ2Q9NPC6 264 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 PCDHAC2Q9Y5I4 1007 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 TLL2Q9Y6L7 1015 aa15.91■□□□□ 0.14
HSPG2-212ENST00000493940 WDR33Q9C0J8 1336 aaKnown RBP15.91■□□□□ 0.14
HSPG2-212ENST00000493940 MAP2K1Q02750 393 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-212ENST00000493940 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
HSPG2-212ENST00000493940 SAPCD2Q86UD0 394 aa15.9■□□□□ 0.14
HSPG2-212ENST00000493940 GGA3Q9NZ52 723 aa15.9■□□□□ 0.14
HSPG2-212ENST00000493940 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
HSPG2-212ENST00000493940 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
HSPG2-212ENST00000493940 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
HSPG2-212ENST00000493940 HSPA8P11142 646 aaKnown RBP15.89■□□□□ 0.13
HSPG2-212ENST00000493940 KCNJ4P48050 445 aa15.89■□□□□ 0.13
HSPG2-212ENST00000493940 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
HSPG2-212ENST00000493940 ANGEL2Q5VTE6 544 aaKnown RBP15.89■□□□□ 0.13
HSPG2-212ENST00000493940 VGLL2Q8N8G2 317 aa15.89■□□□□ 0.13
HSPG2-212ENST00000493940 ZIC5Q96T25 663 aa15.89■□□□□ 0.13
HSPG2-212ENST00000493940 AOX1Q06278 1338 aa15.89■□□□□ 0.13
HSPG2-212ENST00000493940 AOC2O75106 756 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 IL1R1P14778 569 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 GYG1P46976 350 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
HSPG2-212ENST00000493940 PRAMEF18Q5VWM3 479 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
HSPG2-212ENST00000493940 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 ARAP2Q8WZ64 1704 aa15.88■□□□□ 0.13
HSPG2-212ENST00000493940 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
HSPG2-212ENST00000493940 GRM1Q13255 1194 aa15.87■□□□□ 0.13
HSPG2-212ENST00000493940 DCPSQ96C86 337 aaKnown RBP15.87■□□□□ 0.13
HSPG2-212ENST00000493940 ZBED3Q96IU2 234 aaPredicted RBP15.87■□□□□ 0.13
HSPG2-212ENST00000493940 MEIS3Q99687 375 aa15.87■□□□□ 0.13
HSPG2-212ENST00000493940 CASP8AP2Q9UKL3 1982 aa15.86■□□□□ 0.13
HSPG2-212ENST00000493940 WNT10BO00744 389 aa15.86■□□□□ 0.13
HSPG2-212ENST00000493940 SASH1O94885 1247 aa15.86■□□□□ 0.13
HSPG2-212ENST00000493940 GRIK5Q16478 980 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms