RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LPIN2Q92539 896 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 APBB1O00213 710 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
SNX17-208ENST00000493711 SLC5A1P13866 664 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 VGLL2Q8N8G2 317 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
SNX17-208ENST00000493711 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
SNX17-208ENST00000493711 MYH3P11055 1940 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 C21orf2O43822 256 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.04
SNX17-208ENST00000493711 GPSM2P81274 684 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 TNNI3KQ59H18 835 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 C15orf52Q6ZUT6 534 aaKnown RBP15.27■□□□□ 0.04
SNX17-208ENST00000493711 PSMD1Q99460 953 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 EYA3Q99504 573 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 RTFDC1Q9BY42 306 aaPredicted RBP15.27■□□□□ 0.04
SNX17-208ENST00000493711 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 FPGT-TNNI3KV9GXZ4 949 aa15.27■□□□□ 0.04
SNX17-208ENST00000493711 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
SNX17-208ENST00000493711 FGFR2P21802 821 aa15.26■□□□□ 0.03
SNX17-208ENST00000493711 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
SNX17-208ENST00000493711 HELBQ8NG08 1087 aaPredicted RBP15.26■□□□□ 0.03
SNX17-208ENST00000493711 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
SNX17-208ENST00000493711 TAF5LO75529 589 aa15.25■□□□□ 0.03
SNX17-208ENST00000493711 UFL1O94874 794 aa15.25■□□□□ 0.03
SNX17-208ENST00000493711 AACSQ86V21 672 aa15.25■□□□□ 0.03
SNX17-208ENST00000493711 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
SNX17-208ENST00000493711 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
SNX17-208ENST00000493711 COL11A2P13942 1736 aaPredicted RBP15.25■□□□□ 0.03
SNX17-208ENST00000493711 A0A1B0GUL7 405 aa15.24■□□□□ 0.03
SNX17-208ENST00000493711 C6orf229H3BNL8 230 aa15.24■□□□□ 0.03
SNX17-208ENST00000493711 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNX17-208ENST00000493711 CAVIN4Q5BKX8 364 aa15.24■□□□□ 0.03
SNX17-208ENST00000493711 GORABQ5T7V8 394 aa15.24■□□□□ 0.03
SNX17-208ENST00000493711 NEUROD6Q96NK8 337 aa15.24■□□□□ 0.03
SNX17-208ENST00000493711 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
SNX17-208ENST00000493711 CCDC158Q5M9N0 1113 aa15.23■□□□□ 0.03
SNX17-208ENST00000493711 EAF2Q96CJ1 260 aaPredicted RBP15.23■□□□□ 0.03
SNX17-208ENST00000493711 PHF12Q96QT6 1004 aa15.23■□□□□ 0.03
SNX17-208ENST00000493711 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
SNX17-208ENST00000493711 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
SNX17-208ENST00000493711 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
SNX17-208ENST00000493711 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
SNX17-208ENST00000493711 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 TIMM10P62072 90 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 WASHC4Q2M389 1173 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 ZNF804AQ7Z570 1209 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
SNX17-208ENST00000493711 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 TAOK3Q9H2K8 898 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 ZNF609O15014 1411 aa15.22■□□□□ 0.03
SNX17-208ENST00000493711 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 KIAA1551Q9HCM1 1747 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 ERC2O15083 957 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 UQCRFS1P1P0C7P4 283 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 XAGE2Q96GT9 111 aa15.21■□□□□ 0.03
SNX17-208ENST00000493711 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
SNX17-208ENST00000493711 AOX1Q06278 1338 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 COL4A1P02462 1669 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 G3V3G9 751 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 SEMA3EO15041 775 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 MX1P20591 662 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 HIBADHP31937 336 aaKnown RBP15.2■□□□□ 0.02
SNX17-208ENST00000493711 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 DCAF8Q5TAQ9 597 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 COA1Q9GZY4 146 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
SNX17-208ENST00000493711 ECHDC1Q9NTX5 307 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 STAP2Q9UGK3 403 aa15.2■□□□□ 0.02
SNX17-208ENST00000493711 DBNLQ9UJU6 430 aaKnown RBP15.2■□□□□ 0.02
SNX17-208ENST00000493711 HSPA6P17066 643 aa15.19■□□□□ 0.02
SNX17-208ENST00000493711 FBXO33Q7Z6M2 555 aa15.19■□□□□ 0.02
SNX17-208ENST00000493711 FAM84BQ96KN1 310 aaPredicted RBP15.19■□□□□ 0.02
SNX17-208ENST00000493711 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
SNX17-208ENST00000493711 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
SNX17-208ENST00000493711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
SNX17-208ENST00000493711 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
SNX17-208ENST00000493711 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 ARHGAP27Q6ZUM4 889 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 PODNQ7Z5L7 613 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX17-208ENST00000493711 OSBPL3Q9H4L5 887 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 WWC3Q9ULE0 1092 aa15.18■□□□□ 0.02
SNX17-208ENST00000493711 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 SNAP23O00161 211 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 GLRX3O76003 335 aaKnown RBP15.17■□□□□ 0.02
SNX17-208ENST00000493711 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNX17-208ENST00000493711 ATP5JP18859 108 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms