RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 AIMP1Q12904 312 aaKnown RBP11.48□□□□□ -0.57
TSC1-207ENST00000493467 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
TSC1-207ENST00000493467 RBM43Q6ZSC3 357 aaKnown RBP11.48□□□□□ -0.57
TSC1-207ENST00000493467 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
TSC1-207ENST00000493467 MTERF4Q7Z6M4 381 aaKnown RBP11.48□□□□□ -0.57
TSC1-207ENST00000493467 ZNF589Q86UQ0 364 aaPredicted RBP11.48□□□□□ -0.57
TSC1-207ENST00000493467 TICAM2Q86XR7 235 aa11.48□□□□□ -0.57
TSC1-207ENST00000493467 XAGE3Q8WTP9 111 aa11.48□□□□□ -0.57
TSC1-207ENST00000493467 SCAND2PQ9GZW5 306 aaPredicted RBP11.48□□□□□ -0.57
TSC1-207ENST00000493467 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 SPEF2Q9C093 1822 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 PRIMPOLQ96LW4 560 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 MYD88Q99836 296 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 SIL1Q9H173 461 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 KIAA1522Q9P206 1035 aaPredicted RBP11.47□□□□□ -0.57
TSC1-207ENST00000493467 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 TJP1Q07157 1748 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 ZNF609O15014 1411 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 MAP3K13O43283 966 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
TSC1-207ENST00000493467 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 NUP62CLQ9H1M0 184 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 GPCPD1Q9NPB8 672 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 DDX19AQ9NUU7 478 aaKnown RBP11.47□□□□□ -0.57
TSC1-207ENST00000493467 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
TSC1-207ENST00000493467 LAMA4Q16363 1823 aa11.47□□□□□ -0.57
TSC1-207ENST00000493467 PALLDQ8WX93 1383 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
TSC1-207ENST00000493467 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
TSC1-207ENST00000493467 NOLC1Q14978 699 aaKnown RBP eCLIP11.46□□□□□ -0.57
TSC1-207ENST00000493467 COPS6Q7L5N1 327 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 MYRIPQ8NFW9 859 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 FAM200AQ8TCP9 573 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.57
TSC1-207ENST00000493467 ADAMTS19Q8TE59 1207 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 DDX12PQ92771 950 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
TSC1-207ENST00000493467 TMEM94Q12767 1356 aa11.46□□□□□ -0.58
TSC1-207ENST00000493467 UBR2Q8IWV8 1755 aa11.46□□□□□ -0.58
TSC1-207ENST00000493467 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
TSC1-207ENST00000493467 SLC39A6Q13433 755 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 KLHDC4Q8TBB5 520 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.58
TSC1-207ENST00000493467 CASP7P55210 303 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 HMGN5P82970 282 aaKnown RBP11.45□□□□□ -0.58
TSC1-207ENST00000493467 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 ZNF496Q96IT1 587 aaPredicted RBP11.45□□□□□ -0.58
TSC1-207ENST00000493467 HAUS7Q99871 368 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 PAPPAQ13219 1627 aa11.45□□□□□ -0.58
TSC1-207ENST00000493467 AP5Z1O43299 807 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 MYL6BP14649 208 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 LIG1P18858 919 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 LEO1Q8WVC0 666 aaPredicted RBP11.44□□□□□ -0.58
TSC1-207ENST00000493467 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 MRVI1Q9Y6F6 885 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 DCCP43146 1447 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 TYRO3Q06418 890 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 TFCP2Q12800 502 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 RESTQ13127 1097 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 SPATA32Q96LK8 384 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 FMNL2Q96PY5 1086 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 CLSTN2Q9H4D0 955 aa11.44□□□□□ -0.58
TSC1-207ENST00000493467 TTC12Q9H892 705 aaPredicted RBP11.44□□□□□ -0.58
TSC1-207ENST00000493467 FERMT3Q86UX7 667 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 SMARCC2Q8TAQ2 1214 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 LLPHQ9BRT6 129 aaKnown RBP11.43□□□□□ -0.58
TSC1-207ENST00000493467 GPR108Q9NPR9 543 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 MCMDC2Q4G0Z9 681 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 KIAA1524Q8TCG1 905 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 EDC3Q96F86 508 aaKnown RBP11.43□□□□□ -0.58
TSC1-207ENST00000493467 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
TSC1-207ENST00000493467 TNMDQ9H2S6 317 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 KCNF1Q9H3M0 494 aa11.43□□□□□ -0.58
TSC1-207ENST00000493467 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
TSC1-207ENST00000493467 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
TSC1-207ENST00000493467 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
TSC1-207ENST00000493467 PLBD2Q8NHP8 589 aa11.42□□□□□ -0.58
TSC1-207ENST00000493467 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
TSC1-207ENST00000493467 PFKFB2O60825 505 aa11.41□□□□□ -0.58
TSC1-207ENST00000493467 DTNBO60941 627 aa11.41□□□□□ -0.58
TSC1-207ENST00000493467 CYP21A2P08686 494 aa11.41□□□□□ -0.58
TSC1-207ENST00000493467 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
TSC1-207ENST00000493467 RBM10P98175 930 aaKnown RBP11.41□□□□□ -0.58
TSC1-207ENST00000493467 FAM173BQ6P4H8 233 aa11.41□□□□□ -0.58
TSC1-207ENST00000493467 Q6ZUG5 572 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms