RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
SMTN-219ENST00000493335 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 PSME1Q06323 249 aa17.21■□□□□ 0.35
SMTN-219ENST00000493335 URI1O94763 535 aaPredicted RBP17.21■□□□□ 0.35
SMTN-219ENST00000493335 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
SMTN-219ENST00000493335 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
SMTN-219ENST00000493335 E4F1Q66K89 784 aaPredicted RBP17.21■□□□□ 0.35
SMTN-219ENST00000493335 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
SMTN-219ENST00000493335 KCNA6P17658 529 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
SMTN-219ENST00000493335 MNS1Q8NEH6 495 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 PPP1R13BQ96KQ4 1090 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
SMTN-219ENST00000493335 RGPD1P0DJD0 1748 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.2■□□□□ 0.34
SMTN-219ENST00000493335 CCDC66A2RUB6 948 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
SMTN-219ENST00000493335 STK11IPQ8N1F8 1099 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
SMTN-219ENST00000493335 EPC1Q9H2F5 836 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 ZNF446Q9NWS9 450 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 GSDMDP57764 484 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 TIMM10P62072 90 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 IP6K1Q92551 441 aa17.2■□□□□ 0.34
SMTN-219ENST00000493335 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 ARMCX5Q6P1M9 558 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 UBXN4Q92575 508 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 SERPINC1P01008 464 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
SMTN-219ENST00000493335 ATP1A3P13637 1013 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 SLC20A2Q08357 652 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
SMTN-219ENST00000493335 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 PFKFB2O60825 505 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 TPM4P67936 248 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 GCKRQ14397 625 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMTN-219ENST00000493335 CLCN6P51797 869 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 ZNF609O15014 1411 aa17.18■□□□□ 0.34
SMTN-219ENST00000493335 CPLX1O14810 134 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 ATP5JP18859 108 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
SMTN-219ENST00000493335 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 A0A087WZG4 1122 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 SEC31AO94979 1220 aaKnown RBP17.17■□□□□ 0.34
SMTN-219ENST00000493335 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
SMTN-219ENST00000493335 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 UTP14AQ9BVJ6 771 aaKnown RBP17.17■□□□□ 0.34
SMTN-219ENST00000493335 KIAA1468Q9P260 1216 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMTN-219ENST00000493335 PDILTQ8N807 584 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 SMARCC2Q8TAQ2 1214 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
SMTN-219ENST00000493335 E7EWF7 191 aa17.16■□□□□ 0.34
SMTN-219ENST00000493335 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
SMTN-219ENST00000493335 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
SMTN-219ENST00000493335 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
SMTN-219ENST00000493335 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
SMTN-219ENST00000493335 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
SMTN-219ENST00000493335 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
SMTN-219ENST00000493335 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
SMTN-219ENST00000493335 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 TIGD1Q96MW7 591 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 ALDH8A1Q9H2A2 487 aaPredicted RBP17.15■□□□□ 0.34
SMTN-219ENST00000493335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMTN-219ENST00000493335 KIF2AO00139 706 aaPredicted RBP17.15■□□□□ 0.34
SMTN-219ENST00000493335 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 CCDC34Q96HJ3 373 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 CARD6Q9BX69 1037 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 ERBB3P21860 1342 aa17.15■□□□□ 0.34
SMTN-219ENST00000493335 SPTLC2O15270 562 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 ZNF202O95125 648 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 CCDC85AQ96PX6 553 aaPredicted RBP17.14■□□□□ 0.33
SMTN-219ENST00000493335 ZSWIM4Q9H7M6 989 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
SMTN-219ENST00000493335 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
SMTN-219ENST00000493335 FANCCQ00597 558 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 CCDC150Q8NCX0 1101 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
SMTN-219ENST00000493335 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
SMTN-219ENST00000493335 RXRAP19793 462 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 UBASH3AP57075 661 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.33
SMTN-219ENST00000493335 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
SMTN-219ENST00000493335 ADALQ6DHV7 355 aa17.13■□□□□ 0.33
SMTN-219ENST00000493335 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
SMTN-219ENST00000493335 KBTBD3Q8NAB2 608 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms