RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
LIME1-208ENST00000493265 DPY19L2Q6NUT2 758 aa21.2■□□□□ 0.98
LIME1-208ENST00000493265 KIF1BPQ96EK5 621 aa21.2■□□□□ 0.98
LIME1-208ENST00000493265 GPR101Q96P66 508 aaPredicted RBP21.2■□□□□ 0.98
LIME1-208ENST00000493265 LRRCC1Q9C099 1032 aa21.2■□□□□ 0.98
LIME1-208ENST00000493265 PDE8BO95263 885 aa21.19■□□□□ 0.98
LIME1-208ENST00000493265 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
LIME1-208ENST00000493265 VGLL2Q8N8G2 317 aa21.19■□□□□ 0.98
LIME1-208ENST00000493265 GGA1Q9UJY5 639 aa21.19■□□□□ 0.98
LIME1-208ENST00000493265 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 ATP2B3Q16720 1220 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 SOGA3Q5TF21 947 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 NEUROD6Q96NK8 337 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 TAOK3Q9H2K8 898 aa21.18■□□□□ 0.98
LIME1-208ENST00000493265 ATP2B4P23634 1241 aa21.17■□□□□ 0.98
LIME1-208ENST00000493265 PUM3Q15397 648 aaKnown RBP21.17■□□□□ 0.98
LIME1-208ENST00000493265 RTKN2Q8IZC4 609 aa21.17■□□□□ 0.98
LIME1-208ENST00000493265 TBC1D16Q8TBP0 767 aa21.17■□□□□ 0.98
LIME1-208ENST00000493265 POLLQ9UGP5 575 aa21.17■□□□□ 0.98
LIME1-208ENST00000493265 ZNF804BA4D1E1 1349 aa21.17■□□□□ 0.98
LIME1-208ENST00000493265 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 RIMBP2O15034 1052 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 CAPN15O75808 1086 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 TIMM10P62072 90 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
LIME1-208ENST00000493265 AACSQ86V21 672 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
LIME1-208ENST00000493265 A0A1B0GUL7 405 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 SLC5A1P13866 664 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 KLRK1P26718 216 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 TNNI3KQ59H18 835 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
LIME1-208ENST00000493265 LNPKQ9C0E8 428 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
LIME1-208ENST00000493265 LEMD3Q9Y2U8 911 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 FPGT-TNNI3KV9GXZ4 949 aa21.15■□□□□ 0.98
LIME1-208ENST00000493265 DDNO94850 711 aaPredicted RBP21.14■□□□□ 0.97
LIME1-208ENST00000493265 IFIT1P09914 478 aaKnown RBP21.14■□□□□ 0.97
LIME1-208ENST00000493265 HSPA1AP0DMV8 641 aaKnown RBP21.14■□□□□ 0.97
LIME1-208ENST00000493265 HSPA1BP0DMV9 641 aaKnown RBP21.14■□□□□ 0.97
LIME1-208ENST00000493265 UBE4AQ14139 1066 aa21.14■□□□□ 0.97
LIME1-208ENST00000493265 TNS4Q8IZW8 715 aa21.14■□□□□ 0.97
LIME1-208ENST00000493265 EAF2Q96CJ1 260 aaPredicted RBP21.14■□□□□ 0.97
LIME1-208ENST00000493265 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.97
LIME1-208ENST00000493265 ZNF609O15014 1411 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 LTBP1Q14766 1721 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
LIME1-208ENST00000493265 POTEIP0CG38 1075 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 POTEJP0CG39 1038 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 FGFR2P21802 821 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 ADORA1P30542 326 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
LIME1-208ENST00000493265 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 GORABQ5T7V8 394 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 LPIN2Q92539 896 aa21.13■□□□□ 0.97
LIME1-208ENST00000493265 ZNF277Q9NRM2 450 aaPredicted RBP21.13■□□□□ 0.97
LIME1-208ENST00000493265 NUCB1Q02818 461 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 WASHC4Q2M389 1173 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 SUPT20HQ8NEM7 779 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 EYA3Q99504 573 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
LIME1-208ENST00000493265 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
LIME1-208ENST00000493265 GYG1P46976 350 aa21.11■□□□□ 0.97
LIME1-208ENST00000493265 CHADLQ6NUI6 762 aa21.11■□□□□ 0.97
LIME1-208ENST00000493265 TXNRD3Q86VQ6 643 aa21.11■□□□□ 0.97
LIME1-208ENST00000493265 XAGE2Q96GT9 111 aa21.11■□□□□ 0.97
LIME1-208ENST00000493265 DBNDD2Q9BQY9 259 aa21.11■□□□□ 0.97
LIME1-208ENST00000493265 ZC3H12CQ9C0D7 883 aaKnown RBP21.11■□□□□ 0.97
LIME1-208ENST00000493265 G3V3G9 751 aa21.1■□□□□ 0.97
LIME1-208ENST00000493265 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
LIME1-208ENST00000493265 AOC3Q16853 763 aa21.1■□□□□ 0.97
LIME1-208ENST00000493265 DCAF8Q5TAQ9 597 aa21.1■□□□□ 0.97
LIME1-208ENST00000493265 PSMD1Q99460 953 aa21.1■□□□□ 0.97
LIME1-208ENST00000493265 RTFDC1Q9BY42 306 aaPredicted RBP21.1■□□□□ 0.97
LIME1-208ENST00000493265 DOK7Q18PE1 504 aa21.09■□□□□ 0.97
LIME1-208ENST00000493265 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
LIME1-208ENST00000493265 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
LIME1-208ENST00000493265 DBNLQ9UJU6 430 aaKnown RBP21.09■□□□□ 0.97
LIME1-208ENST00000493265 SCN4AP35499 1836 aa21.08■□□□□ 0.97
LIME1-208ENST00000493265 BCAMP50895 628 aa21.08■□□□□ 0.97
LIME1-208ENST00000493265 CAVIN4Q5BKX8 364 aa21.08■□□□□ 0.97
LIME1-208ENST00000493265 SKAP1Q86WV1 359 aa21.08■□□□□ 0.97
LIME1-208ENST00000493265 MKRN1Q9UHC7 482 aaKnown RBP21.08■□□□□ 0.97
LIME1-208ENST00000493265 MED23Q9ULK4 1368 aa21.08■□□□□ 0.96
LIME1-208ENST00000493265 IARSP41252 1262 aaKnown RBP21.07■□□□□ 0.96
LIME1-208ENST00000493265 LARGE2Q8N3Y3 721 aa21.07■□□□□ 0.96
LIME1-208ENST00000493265 FAM84BQ96KN1 310 aaPredicted RBP21.07■□□□□ 0.96
LIME1-208ENST00000493265 IQSEC3Q9UPP2 1182 aaPredicted RBP21.07■□□□□ 0.96
LIME1-208ENST00000493265 HIBADHP31937 336 aaKnown RBP21.06■□□□□ 0.96
LIME1-208ENST00000493265 PHKA1P46020 1223 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 TSHZ3Q63HK5 1081 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 ZNF804AQ7Z570 1209 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 DBNDD1Q9H9R9 158 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 CREBZFQ9NS37 354 aa21.06■□□□□ 0.96
LIME1-208ENST00000493265 ARAP2Q8WZ64 1704 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms