RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 LDHAL6AQ6ZMR3 332 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 FAM184AQ8NB25 1140 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 RIC1Q4ADV7 1423 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 PTPDC1A2A3K4 754 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 MCAMP43121 646 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 CCDC158Q5M9N0 1113 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 TRMT112Q9UI30 125 aaKnown RBP14.72□□□□□ -0.05
HMGN1-220ENST00000492280 ADCY5O95622 1261 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 DHX32Q7L7V1 743 aaKnown RBP14.72□□□□□ -0.05
HMGN1-220ENST00000492280 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
HMGN1-220ENST00000492280 LEO1Q8WVC0 666 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-220ENST00000492280 PGBD1Q96JS3 809 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 TTC12Q9H892 705 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-220ENST00000492280 CNNM1Q9NRU3 951 aa14.72□□□□□ -0.05
HMGN1-220ENST00000492280 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 STARD3NLO95772 234 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 PCCAP05165 728 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-220ENST00000492280 ATP2B3Q16720 1220 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 GIGYF2Q6Y7W6 1299 aaKnown RBP14.71□□□□□ -0.05
HMGN1-220ENST00000492280 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 HELLSQ9NRZ9 838 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
HMGN1-220ENST00000492280 UBN2Q6ZU65 1347 aa14.71□□□□□ -0.05
HMGN1-220ENST00000492280 NR1I2O75469 434 aa14.71□□□□□ -0.06
HMGN1-220ENST00000492280 PDCP20941 246 aa14.71□□□□□ -0.06
HMGN1-220ENST00000492280 ZBTB38Q8NAP3 1195 aaPredicted RBP14.71□□□□□ -0.06
HMGN1-220ENST00000492280 TTLL11Q8NHH1 800 aa14.71□□□□□ -0.06
HMGN1-220ENST00000492280 FUCA2Q9BTY2 467 aa14.71□□□□□ -0.06
HMGN1-220ENST00000492280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.71□□□□□ -0.066e-9■■■■■ 32.8
HMGN1-220ENST00000492280 NWD2Q9ULI1 1742 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 IRS4O14654 1257 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-220ENST00000492280 RXRAP19793 462 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 RESTQ13127 1097 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 STK11IPQ8N1F8 1099 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 ERCC4Q92889 916 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-220ENST00000492280 ZKSCAN5Q9Y2L8 839 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 IDH1O75874 414 aaKnown RBP14.7□□□□□ -0.06
HMGN1-220ENST00000492280 CIAO1O76071 339 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 CYP19A1P11511 503 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-220ENST00000492280 SPC24Q8NBT2 197 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 GPR108Q9NPR9 543 aa14.7□□□□□ -0.06
HMGN1-220ENST00000492280 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 FGAP02671 866 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 PHKA1P46020 1223 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 KCNQ4P56696 695 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 R3HCC1Q9Y3T6 440 aaKnown RBP14.69□□□□□ -0.06
HMGN1-220ENST00000492280 EP400Q96L91 3159 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 LUZP1Q86V48 1076 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
HMGN1-220ENST00000492280 GPAA1O43292 621 aa14.68□□□□□ -0.06
HMGN1-220ENST00000492280 CTSWP56202 376 aa14.68□□□□□ -0.06
HMGN1-220ENST00000492280 DZIP3Q86Y13 1208 aaKnown RBP14.68□□□□□ -0.06
HMGN1-220ENST00000492280 PFKFB2O60825 505 aa14.68□□□□□ -0.06
HMGN1-220ENST00000492280 EXOSC10Q01780 885 aaKnown RBP14.68□□□□□ -0.06
HMGN1-220ENST00000492280 PIH1D3Q9NQM4 214 aaKnown RBP14.68□□□□□ -0.06
HMGN1-220ENST00000492280 SEC31BQ9NQW1 1179 aa14.68□□□□□ -0.06
HMGN1-220ENST00000492280 SLIT2O94813 1529 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 CSF1RP07333 972 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 PDIA3P30101 505 aaKnown RBP14.67□□□□□ -0.06
HMGN1-220ENST00000492280 ALDH8A1Q9H2A2 487 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-220ENST00000492280 RIPOR2Q9Y4F9 1068 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 NUP98P52948 1817 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 BCL9O00512 1426 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 CSPP1Q1MSJ5 1256 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 WWC3Q9ULE0 1092 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 IQSEC3Q9UPP2 1182 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-220ENST00000492280 AKAP11Q9UKA4 1901 aa14.67□□□□□ -0.06
HMGN1-220ENST00000492280 APPP05067 770 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 SLC9C2Q5TAH2 1124 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 NHSL1Q5SYE7 1610 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 NUTM2BA6NNL0 878 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-220ENST00000492280 NUTM2EB1AL46 878 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-220ENST00000492280 EXOC5O00471 708 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 TYRO3Q06418 890 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 NUTM2AQ8IVF1 878 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-220ENST00000492280 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 USP28Q96RU2 1077 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 SENP2Q9HC62 589 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
HMGN1-220ENST00000492280 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 PRC1O43663 620 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 ANTXR2P58335 489 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 MYH7P12883 1935 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 KLF18A0A0U1RQI7 1052 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 WTIPA6NIX2 430 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-220ENST00000492280 GOLGA8BA8MQT2 603 aa14.65□□□□□ -0.06
HMGN1-220ENST00000492280 FDPSP14324 419 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms