RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, human

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-223	ENST00000492275	PSMD14	O00487	310 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	CIAO1	O76071	339 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	PDE8B	O95263	885 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	SCNN1D	P51172	638 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	UBE4A	Q14139	1066 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	PODN	Q7Z5L7	613 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	COA1	Q9GZY4	146 aa		32.15	■■■□□ 2.74
TTC3-223	ENST00000492275	ATP8B2	P98198	1209 aa		32.14	■■■□□ 2.74
TTC3-223	ENST00000492275	DDX19B	Q9UMR2	479 aa		32.14	■■■□□ 2.74
TTC3-223	ENST00000492275	IQCA1L	A6NCM1	817 aa		32.13	■■■□□ 2.73
TTC3-223	ENST00000492275	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.13	■■■□□ 2.73
TTC3-223	ENST00000492275	HACL1	Q9UJ83	578 aa		32.13	■■■□□ 2.73
TTC3-223	ENST00000492275	TOMM70	O94826	608 aa		32.12	■■■□□ 2.73
TTC3-223	ENST00000492275	GMPS	P49915	693 aa	Predicted RBP	32.12	■■■□□ 2.73
TTC3-223	ENST00000492275	VIL1	P09327	827 aa	Known RBP	32.11	■■■□□ 2.73
TTC3-223	ENST00000492275	POLA2	Q14181	598 aa		32.11	■■■□□ 2.73
TTC3-223	ENST00000492275	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.11	■■■□□ 2.73
TTC3-223	ENST00000492275	ZNF646	O15015	1829 aa	Predicted RBP	32.11	■■■□□ 2.73
TTC3-223	ENST00000492275	IL15	P40933	162 aa	Predicted RBP	32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	EPS15	P42566	896 aa		32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	SSH3	Q8TE77	659 aa		32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	CD209	Q9NNX6	404 aa		32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	ZBTB40	Q9NUA8	1239 aa		32.1	■■■□□ 2.73
TTC3-223	ENST00000492275	FGFR2	P21802	821 aa		32.09	■■■□□ 2.73
TTC3-223	ENST00000492275	EPHX2	P34913	555 aa		32.09	■■■□□ 2.73
TTC3-223	ENST00000492275	RRP1	P56182	461 aa	Known RBP	32.09	■■■□□ 2.73
TTC3-223	ENST00000492275	GPRC5D	Q9NZD1	345 aa		32.09	■■■□□ 2.73
TTC3-223	ENST00000492275	C1QTNF8	P60827	252 aa		32.08	■■■□□ 2.73
TTC3-223	ENST00000492275	USP17L3	A6NCW0	530 aa		32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	USP17L4	A6NCW7	530 aa		32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	LMOD1	P29536	600 aa	Predicted RBP	32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	CEP85	Q6P2H3	762 aa		32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	USP17L1	Q7RTZ2	530 aa		32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	RBM46	Q8TBY0	533 aa	Known RBP	32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	FAM84B	Q96KN1	310 aa	Predicted RBP	32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	CEP126	Q9P2H0	1117 aa		32.07	■■■□□ 2.72
TTC3-223	ENST00000492275	POTEI	P0CG38	1075 aa		32.06	■■■□□ 2.72
TTC3-223	ENST00000492275	POTEJ	P0CG39	1038 aa		32.06	■■■□□ 2.72
TTC3-223	ENST00000492275	GYG1	P46976	350 aa		32.06	■■■□□ 2.72
TTC3-223	ENST00000492275	PUM3	Q15397	648 aa	Known RBP	32.06	■■■□□ 2.72
TTC3-223	ENST00000492275	ZNF804A	Q7Z570	1209 aa		32.06	■■■□□ 2.72
TTC3-223	ENST00000492275	IL1R1	P14778	569 aa		32.05	■■■□□ 2.72
TTC3-223	ENST00000492275	DPF2	Q92785	391 aa		32.05	■■■□□ 2.72
TTC3-223	ENST00000492275	CNOT7	Q9UIV1	285 aa	Known RBP	32.05	■■■□□ 2.72
TTC3-223	ENST00000492275	SHTN1	A0MZ66	631 aa		32.04	■■■□□ 2.72
TTC3-223	ENST00000492275	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.04	■■■□□ 2.72
TTC3-223	ENST00000492275	RPS12	P25398	132 aa	Known RBP	32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	HIBADH	P31937	336 aa	Known RBP	32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	DACT2	Q5SW24	774 aa		32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	STRIP1	Q5VSL9	837 aa		32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	FBXO33	Q7Z6M2	555 aa		32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	CHMP4B	Q9H444	224 aa	Known RBP	32.03	■■■□□ 2.72
TTC3-223	ENST00000492275	TTLL5	Q6EMB2	1281 aa		32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	LPIN2	Q92539	896 aa		32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	GML	Q99445	158 aa		32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	MXD3	Q9BW11	206 aa		32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	ADAMTSL1	Q8N6G6	1762 aa		32.02	■■■□□ 2.72
TTC3-223	ENST00000492275	GTF2I	P78347	998 aa		32.01	■■■□□ 2.71
TTC3-223	ENST00000492275	EAPP	Q56P03	285 aa	Predicted RBP	32.01	■■■□□ 2.71
TTC3-223	ENST00000492275	MICALL2	Q8IY33	904 aa		32.01	■■■□□ 2.71
TTC3-223	ENST00000492275	AGBL3	Q8NEM8	1001 aa		32.01	■■■□□ 2.71
TTC3-223	ENST00000492275	TDRD7	Q8NHU6	1098 aa	Known RBP	32.01	■■■□□ 2.71
TTC3-223	ENST00000492275	ZNF609	O15014	1411 aa		32	■■■□□ 2.71
TTC3-223	ENST00000492275	IFIT1	P09914	478 aa	Known RBP	32	■■■□□ 2.71
TTC3-223	ENST00000492275	TFCP2	Q12800	502 aa		32	■■■□□ 2.71
TTC3-223	ENST00000492275	G3BP1	Q13283	466 aa	Known RBP eCLIP	32	■■■□□ 2.71
TTC3-223	ENST00000492275	ATP2B3	Q16720	1220 aa		32	■■■□□ 2.71
TTC3-223	ENST00000492275	PNMA8A	Q86V59	439 aa	Predicted RBP	32	■■■□□ 2.71
TTC3-223	ENST00000492275	FBXW7	Q969H0	707 aa		32	■■■□□ 2.71
TTC3-223	ENST00000492275	ADARB2	Q9NS39	739 aa	Known RBP	32	■■■□□ 2.71
TTC3-223	ENST00000492275	SLC5A1	P13866	664 aa		31.99	■■■□□ 2.71
TTC3-223	ENST00000492275	NOP58	Q9Y2X3	529 aa	Known RBP	31.99	■■■□□ 2.71
TTC3-223	ENST00000492275		H7C1D1	291 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	SASH1	O94885	1247 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	BCAM	P50895	628 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	CAVIN4	Q5BKX8	364 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	USP50	Q70EL3	339 aa	Predicted RBP	31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	SIRT2	Q8IXJ6	389 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	SMC1B	Q8NDV3	1235 aa		31.98	■■■□□ 2.71
TTC3-223	ENST00000492275	SURF6	O75683	361 aa	Known RBP	31.97	■■■□□ 2.71
TTC3-223	ENST00000492275	FSTL1	Q12841	308 aa		31.97	■■■□□ 2.71
TTC3-223	ENST00000492275	LDHD	Q86WU2	507 aa		31.97	■■■□□ 2.71
TTC3-223	ENST00000492275	HIRA	P54198	1017 aa	Predicted RBP	31.96	■■■□□ 2.71
TTC3-223	ENST00000492275	TIMM10	P62072	90 aa		31.95	■■■□□ 2.71
TTC3-223	ENST00000492275	CHADL	Q6NUI6	762 aa		31.95	■■■□□ 2.71
TTC3-223	ENST00000492275	SAMD7	Q7Z3H4	446 aa		31.95	■■■□□ 2.71
TTC3-223	ENST00000492275	VPS37D	Q86XT2	251 aa		31.95	■■■□□ 2.71
TTC3-223	ENST00000492275	TRPM4	Q8TD43	1214 aa		31.95	■■■□□ 2.71
TTC3-223	ENST00000492275	ARAP2	Q8WZ64	1704 aa		31.95	■■■□□ 2.7
TTC3-223	ENST00000492275	CERS5	Q8N5B7	392 aa		31.94	■■■□□ 2.7
TTC3-223	ENST00000492275	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.94	■■■□□ 2.7
TTC3-223	ENST00000492275	JAG2	Q9Y219	1238 aa		31.94	■■■□□ 2.7
TTC3-223	ENST00000492275	CLEC11A	Q9Y240	323 aa		31.94	■■■□□ 2.7
TTC3-223	ENST00000492275	FAM205A	Q6ZU69	1335 aa		31.94	■■■□□ 2.7
TTC3-223	ENST00000492275	EGFR	P00533	1210 aa		31.93	■■■□□ 2.7
TTC3-223	ENST00000492275	ADORA1	P30542	326 aa		31.93	■■■□□ 2.7
TTC3-223	ENST00000492275	ZNF280A	P59817	542 aa	Predicted RBP	31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms