RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 UTYO14607 1347 aa16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 G3V3G9 751 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 TAF5LO75529 589 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 IFIT5Q13325 482 aaKnown RBP16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 DACT2Q5SW24 774 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 CDC37L1Q7L3B6 337 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 AGBL3Q8NEM8 1001 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 TLL2Q9Y6L7 1015 aa16.07■□□□□ 0.16
SEC61A1-206ENST00000491668 CELF2O95319 508 aaKnown RBP16.06■□□□□ 0.16
SEC61A1-206ENST00000491668 KIF4BQ2VIQ3 1234 aa16.06■□□□□ 0.16
SEC61A1-206ENST00000491668 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
SEC61A1-206ENST00000491668 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 PTPRCP08575 1304 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 WDR33Q9C0J8 1336 aaKnown RBP16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 ANKRD44Q8N8A2 993 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
SEC61A1-206ENST00000491668 FOXN1O15353 648 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 CYP4F22Q6NT55 531 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 KRT26Q7Z3Y9 468 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
SEC61A1-206ENST00000491668 CCDC57Q2TAC2 916 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 RABL6Q3YEC7 729 aaPredicted RBP16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 C15orf52Q6ZUT6 534 aaKnown RBP16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 USP44Q9H0E7 712 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 GGA3Q9NZ52 723 aa16.03■□□□□ 0.16
SEC61A1-206ENST00000491668 SCARF1Q14162 830 aa16.02■□□□□ 0.16
SEC61A1-206ENST00000491668 CD209Q9NNX6 404 aa16.02■□□□□ 0.16
SEC61A1-206ENST00000491668 MYOZ2Q9NPC6 264 aa16.02■□□□□ 0.16
SEC61A1-206ENST00000491668 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
SEC61A1-206ENST00000491668 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
SEC61A1-206ENST00000491668 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
SEC61A1-206ENST00000491668 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
SEC61A1-206ENST00000491668 SCAF8Q9UPN6 1271 aaKnown RBP16.01■□□□□ 0.15
SEC61A1-206ENST00000491668 AOC2O75106 756 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 KCNJ4P48050 445 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 GTF2IP78347 998 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 NBPF9Q3BBW0 867 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 TTLL5Q6EMB2 1281 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 CERS5Q8N5B7 392 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 HHIPL1Q96JK4 782 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 RIPOR2Q9Y4F9 1068 aa16■□□□□ 0.15
SEC61A1-206ENST00000491668 PLIN1O60240 522 aa15.99■□□□□ 0.15
SEC61A1-206ENST00000491668 IL1R1P14778 569 aa15.99■□□□□ 0.15
SEC61A1-206ENST00000491668 GRM1Q13255 1194 aa15.99■□□□□ 0.15
SEC61A1-206ENST00000491668 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
SEC61A1-206ENST00000491668 CNNM1Q9NRU3 951 aa15.99■□□□□ 0.15
SEC61A1-206ENST00000491668 MYO3BQ8WXR4 1341 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 ECE1P42892 770 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 LRRC24Q50LG9 513 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 PAXIP1Q6ZW49 1069 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 KIAA0825Q8IV33 1275 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 SULF1Q8IWU6 871 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 KLHDC4Q8TBB5 520 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 ZBED3Q96IU2 234 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 ZIC5Q96T25 663 aa15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
SEC61A1-206ENST00000491668 WNT10BO00744 389 aa15.97■□□□□ 0.15
SEC61A1-206ENST00000491668 SASH1O94885 1247 aa15.97■□□□□ 0.15
SEC61A1-206ENST00000491668 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
SEC61A1-206ENST00000491668 HUNKP57058 714 aa15.97■□□□□ 0.15
SEC61A1-206ENST00000491668 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
SEC61A1-206ENST00000491668 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.15
SEC61A1-206ENST00000491668 RFX5P48382 616 aaPredicted RBP15.96■□□□□ 0.15
SEC61A1-206ENST00000491668 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
SEC61A1-206ENST00000491668 JAG2Q9Y219 1238 aa15.96■□□□□ 0.15
SEC61A1-206ENST00000491668 FAM155AB1AL88 458 aaPredicted RBP15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 MAP2K2P36507 400 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 GYG1P46976 350 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 LBX1P52954 281 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 MAP2K1Q02750 393 aaPredicted RBP15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 UBE4AQ14139 1066 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 PRAMEF18Q5VWM3 479 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
SEC61A1-206ENST00000491668 OGFOD1Q8N543 542 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms