RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
NPHP3-208ENST00000490993 TPM2P07951 284 aa8.57□□□□□ -1.04
NPHP3-208ENST00000490993 PTH1RQ03431 593 aa8.57□□□□□ -1.04
NPHP3-208ENST00000490993 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
NPHP3-208ENST00000490993 C8orf37Q96NL8 207 aa8.57□□□□□ -1.04
NPHP3-208ENST00000490993 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
NPHP3-208ENST00000490993 DBNLQ9UJU6 430 aaKnown RBP8.57□□□□□ -1.04
NPHP3-208ENST00000490993 A0A0D9SFI3 127 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 IARSP41252 1262 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 ZNF445P59923 1031 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 GSTO1P78417 241 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 DZIP1Q86YF9 867 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 RBM27Q9P2N5 1060 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 SETD1AO15047 1707 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 TXLNAP40222 546 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 LMBRD1Q9NUN5 540 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 ANO10Q9NW15 660 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 CATIPQ7Z7H3 387 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 CRNKL1Q9BZJ0 848 aaKnown RBP8.56□□□□□ -1.04
NPHP3-208ENST00000490993 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
NPHP3-208ENST00000490993 CD2BP2O95400 341 aaKnown RBP8.55□□□□□ -1.04
NPHP3-208ENST00000490993 SLC4A4Q9Y6R1 1079 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 ZBTB43O43298 467 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 CYP7A1P22680 504 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
NPHP3-208ENST00000490993 KLHL34Q8N239 644 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 PIGBQ92521 554 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 DENND2AQ9ULE3 1009 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 PIK3C2AO00443 1686 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 TAF5LO75529 589 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 BAG3O95817 575 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 CPA1P15085 419 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 ST5P78524 1137 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-208ENST00000490993 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-208ENST00000490993 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 KCNG4Q8TDN1 519 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 ESR2Q92731 530 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 TMEM87BQ96K49 555 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 USP5P45974 858 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 PDE4BQ07343 736 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 HS1BP3Q53T59 392 aa8.55□□□□□ -1.04
NPHP3-208ENST00000490993 CTCFLQ8NI51 663 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-208ENST00000490993 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 WTAPQ15007 396 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 APOBRQ0VD83 1088 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 BRAPQ7Z569 592 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 MAGEB6Q8N7X4 407 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 KIF2CQ99661 725 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 CDHR2Q9BYE9 1310 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 CAMK4Q16566 473 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 GPAA1O43292 621 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 CCP110O43303 1012 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 NAA16Q6N069 864 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
NPHP3-208ENST00000490993 RTL9Q8NET4 1388 aa8.54□□□□□ -1.04
NPHP3-208ENST00000490993 ZAP70P43403 619 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 STX1AQ16623 288 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 CLEC17AQ6ZS10 378 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
NPHP3-208ENST00000490993 CALM1P0DP23 149 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 CALM2P0DP24 149 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 CALM3P0DP25 149 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 KIF5BP33176 963 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 PDIA6Q15084 440 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 ME3Q16798 604 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 STK11IPQ8N1F8 1099 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 FSIP1Q8NA03 581 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 SPATA5Q8NB90 893 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 ZNF274Q96GC6 653 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-208ENST00000490993 SLIT3O75094 1523 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 KDM4AO75164 1064 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-208ENST00000490993 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 NECTIN1Q15223 517 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 NLRP10Q86W26 655 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 ISCA1Q9BUE6 129 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 E7EWF7 191 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 SIK1P57059 783 aa8.53□□□□□ -1.04
NPHP3-208ENST00000490993 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-208ENST00000490993 PEAK1Q9H792 1746 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms