RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 CTAGE8P0CG41 777 aa13.23□□□□□ -0.29
PCSK9-202ENST00000490692 MTX1Q13505 466 aa13.23□□□□□ -0.29
PCSK9-202ENST00000490692 CCDC129Q6ZRS4 1044 aa13.23□□□□□ -0.29
PCSK9-202ENST00000490692 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
PCSK9-202ENST00000490692 CTAGE6Q86UF2 777 aa13.23□□□□□ -0.29
PCSK9-202ENST00000490692 CTAGE4Q8IX94 777 aa13.23□□□□□ -0.29
PCSK9-202ENST00000490692 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 EBAG9O00559 213 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 LONRF2Q1L5Z9 754 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
PCSK9-202ENST00000490692 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 PARD6BQ9BYG5 372 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
PCSK9-202ENST00000490692 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 ELP1O95163 1332 aa13.22□□□□□ -0.29
PCSK9-202ENST00000490692 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
PCSK9-202ENST00000490692 MAP2K2P36507 400 aa13.21□□□□□ -0.29
PCSK9-202ENST00000490692 PGBD1Q96JS3 809 aa13.21□□□□□ -0.29
PCSK9-202ENST00000490692 ZEB2O60315 1214 aa13.21□□□□□ -0.29
PCSK9-202ENST00000490692 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCSK9-202ENST00000490692 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.29
PCSK9-202ENST00000490692 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
PCSK9-202ENST00000490692 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.29
PCSK9-202ENST00000490692 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.3
PCSK9-202ENST00000490692 RPS6KB1P23443 525 aa13.21□□□□□ -0.3
PCSK9-202ENST00000490692 IL13P35225 146 aa13.21□□□□□ -0.3
PCSK9-202ENST00000490692 PLA2G4AP47712 749 aa13.21□□□□□ -0.3
PCSK9-202ENST00000490692 NLRP6P59044 892 aa13.21□□□□□ -0.3
PCSK9-202ENST00000490692 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.3
PCSK9-202ENST00000490692 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCSK9-202ENST00000490692 SPTLC2O15270 562 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 MYL6BP14649 208 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 STX17P56962 302 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC175P0C221 793 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 LMTK2Q8IWU2 1503 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 CHL1O00533 1208 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 FKBP4Q02790 459 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCSK9-202ENST00000490692 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
PCSK9-202ENST00000490692 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 LCMT1Q9UIC8 334 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 ERLIN2O94905 339 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
PCSK9-202ENST00000490692 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
PCSK9-202ENST00000490692 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
PCSK9-202ENST00000490692 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 TTC19Q6DKK2 380 aaPredicted RBP13.19□□□□□ -0.3
PCSK9-202ENST00000490692 KIAA1328Q86T90 577 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
PCSK9-202ENST00000490692 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
PCSK9-202ENST00000490692 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 MYL5Q02045 173 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 EIF3CLB5ME19 914 aaKnown RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 TUBB4AP04350 444 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 CCZ1BP86790 482 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 CCZ1P86791 482 aaPredicted RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 DHX58Q96C10 678 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 CAMSAP1Q5T5Y3 1602 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
PCSK9-202ENST00000490692 USP44Q9H0E7 712 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
PCSK9-202ENST00000490692 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
PCSK9-202ENST00000490692 SRLQ86TD4 932 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 GLI2P10070 1586 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CDC25BP30305 580 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 NDUFA8P51970 172 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 C1orf141Q5JVX7 400 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC181Q5TID7 509 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms