RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TRAF5O00463 557 aa22.42■■□□□ 1.18
ABCF3-217ENST00000489719 ABT1Q9ULW3 272 aaKnown RBP22.42■■□□□ 1.18
ABCF3-217ENST00000489719 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
ABCF3-217ENST00000489719 USP17L8P0C7I0 530 aa22.4■■□□□ 1.18
ABCF3-217ENST00000489719 FMR1Q06787 632 aaKnown RBP eCLIP22.4■■□□□ 1.18
ABCF3-217ENST00000489719 DEFB115Q30KQ5 88 aa22.4■■□□□ 1.18
ABCF3-217ENST00000489719 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
ABCF3-217ENST00000489719 STRIP1Q5VSL9 837 aa22.4■■□□□ 1.18
ABCF3-217ENST00000489719 TTLL5Q6EMB2 1281 aa22.4■■□□□ 1.18
ABCF3-217ENST00000489719 USP48Q86UV5 1035 aa22.4■■□□□ 1.18
ABCF3-217ENST00000489719 DCPSQ96C86 337 aaKnown RBP22.4■■□□□ 1.18
ABCF3-217ENST00000489719 SNAP23O00161 211 aa22.39■■□□□ 1.17
ABCF3-217ENST00000489719 KLRK1P26718 216 aa22.39■■□□□ 1.17
ABCF3-217ENST00000489719 ZNF280AP59817 542 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-217ENST00000489719 KIF4BQ2VIQ3 1234 aa22.39■■□□□ 1.17
ABCF3-217ENST00000489719 GMLQ99445 158 aa22.39■■□□□ 1.17
ABCF3-217ENST00000489719 HDAC5Q9UQL6 1122 aa22.39■■□□□ 1.17
ABCF3-217ENST00000489719 ADAMTSL1Q8N6G6 1762 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 MYH3P11055 1940 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
ABCF3-217ENST00000489719 EGFRP00533 1210 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 DACT2Q5SW24 774 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 CST9Q5W186 159 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 C15orf52Q6ZUT6 534 aaKnown RBP22.38■■□□□ 1.17
ABCF3-217ENST00000489719 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 ANKRD44Q8N8A2 993 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 ARHGAP45Q92619 1136 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 CD209Q9NNX6 404 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 CNTNAP1P78357 1384 aa22.38■■□□□ 1.17
ABCF3-217ENST00000489719 CELF2O95319 508 aaKnown RBP22.37■■□□□ 1.17
ABCF3-217ENST00000489719 GTF2IP78347 998 aa22.37■■□□□ 1.17
ABCF3-217ENST00000489719 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
ABCF3-217ENST00000489719 PUS3Q9BZE2 481 aaKnown RBP22.37■■□□□ 1.17
ABCF3-217ENST00000489719 MYO3BQ8WXR4 1341 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 UBTFL1P0CB47 393 aaPredicted RBP22.36■■□□□ 1.17
ABCF3-217ENST00000489719 UBE4AQ14139 1066 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 KRT26Q7Z3Y9 468 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 ZNF408Q9H9D4 720 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 MYOZ2Q9NPC6 264 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 RIPOR2Q9Y4F9 1068 aa22.36■■□□□ 1.17
ABCF3-217ENST00000489719 MROH5Q6ZUA9 1318 aa22.35■■□□□ 1.17
ABCF3-217ENST00000489719 RASSF10A6NK89 507 aa22.35■■□□□ 1.17
ABCF3-217ENST00000489719 VEGFBP49765 207 aa22.35■■□□□ 1.17
ABCF3-217ENST00000489719 MMP14P50281 582 aa22.35■■□□□ 1.17
ABCF3-217ENST00000489719 SCARF1Q14162 830 aa22.35■■□□□ 1.17
ABCF3-217ENST00000489719 SULF1Q8IWU6 871 aa22.34■■□□□ 1.17
ABCF3-217ENST00000489719 HDAC9Q9UKV0 1011 aa22.34■■□□□ 1.17
ABCF3-217ENST00000489719 METTL24Q5JXM2 366 aa22.33■■□□□ 1.17
ABCF3-217ENST00000489719 PAXIP1Q6ZW49 1069 aaPredicted RBP22.33■■□□□ 1.17
ABCF3-217ENST00000489719 FRAT1Q92837 279 aaPredicted RBP22.33■■□□□ 1.17
ABCF3-217ENST00000489719 BCAR3O75815 825 aa22.32■■□□□ 1.16
ABCF3-217ENST00000489719 IL1R1P14778 569 aa22.32■■□□□ 1.16
ABCF3-217ENST00000489719 LRRC24Q50LG9 513 aa22.32■■□□□ 1.16
ABCF3-217ENST00000489719 GGA3Q9NZ52 723 aa22.32■■□□□ 1.16
ABCF3-217ENST00000489719 TLL2Q9Y6L7 1015 aa22.32■■□□□ 1.16
ABCF3-217ENST00000489719 ZNF609O15014 1411 aa22.31■■□□□ 1.16
ABCF3-217ENST00000489719 HIBADHP31937 336 aaKnown RBP22.31■■□□□ 1.16
ABCF3-217ENST00000489719 ECE1P42892 770 aa22.31■■□□□ 1.16
ABCF3-217ENST00000489719 KLHDC4Q8TBB5 520 aa22.31■■□□□ 1.16
ABCF3-217ENST00000489719 IRS2Q9Y4H2 1338 aa22.31■■□□□ 1.16
ABCF3-217ENST00000489719 HSPA1AP0DMV8 641 aaKnown RBP22.3■■□□□ 1.16
ABCF3-217ENST00000489719 HSPA1BP0DMV9 641 aaKnown RBP22.3■■□□□ 1.16
ABCF3-217ENST00000489719 ANGEL2Q5VTE6 544 aaKnown RBP22.3■■□□□ 1.16
ABCF3-217ENST00000489719 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
ABCF3-217ENST00000489719 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
ABCF3-217ENST00000489719 WDR33Q9C0J8 1336 aaKnown RBP22.3■■□□□ 1.16
ABCF3-217ENST00000489719 ADM5C9JUS6 153 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 SASH1O94885 1247 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 PDE8BO95263 885 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 DLK2Q6UY11 383 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 VPS37DQ86XT2 251 aa22.29■■□□□ 1.16
ABCF3-217ENST00000489719 ASTN2O75129 1339 aaPredicted RBP22.29■■□□□ 1.16
ABCF3-217ENST00000489719 GNAI3P08754 354 aa22.28■■□□□ 1.16
ABCF3-217ENST00000489719 GYG1P46976 350 aa22.28■■□□□ 1.16
ABCF3-217ENST00000489719 GRM1Q13255 1194 aa22.28■■□□□ 1.16
ABCF3-217ENST00000489719 SAPCD2Q86UD0 394 aa22.28■■□□□ 1.16
ABCF3-217ENST00000489719 C2orf69Q8N8R5 385 aa22.28■■□□□ 1.16
ABCF3-217ENST00000489719 FAM84BQ96KN1 310 aaPredicted RBP22.28■■□□□ 1.16
ABCF3-217ENST00000489719 LRRFIP2Q9Y608 721 aaKnown RBP22.28■■□□□ 1.16
ABCF3-217ENST00000489719 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 SCN9AQ15858 1988 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 EYA2O00167 538 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 NBPF9Q3BBW0 867 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 CAVIN4Q5BKX8 364 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 CAPNS2Q96L46 248 aa22.27■■□□□ 1.16
ABCF3-217ENST00000489719 TRIM27P14373 513 aa22.26■■□□□ 1.15
ABCF3-217ENST00000489719 RFX5P48382 616 aaPredicted RBP22.26■■□□□ 1.15
ABCF3-217ENST00000489719 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
ABCF3-217ENST00000489719 PTPN12Q05209 780 aaKnown RBP22.26■■□□□ 1.15
ABCF3-217ENST00000489719 CYP4F22Q6NT55 531 aa22.26■■□□□ 1.15
ABCF3-217ENST00000489719 TDRD7Q8NHU6 1098 aaKnown RBP22.26■■□□□ 1.15
ABCF3-217ENST00000489719 MEIS3Q99687 375 aa22.26■■□□□ 1.15
ABCF3-217ENST00000489719 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
ABCF3-217ENST00000489719 PITPNM2Q9BZ72 1349 aa22.26■■□□□ 1.15
ABCF3-217ENST00000489719 WNT10BO00744 389 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
ABCF3-217ENST00000489719 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms