RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TIMM10P62072 90 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 NIM1KQ8IY84 436 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 EYA3Q99504 573 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 FBXO3Q9UK99 471 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 A0A1B0GUL6 1792 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 CCDC88AQ3V6T2 1871 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 SMARCA5O60264 1052 aaPredicted RBP10.25□□□□□ -0.77
SF1-218ENST00000489544 ECE2O60344 883 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 RAD17O75943 681 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 IGHDP01880 384 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 BCAMP50895 628 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 PUM3Q15397 648 aaKnown RBP10.25□□□□□ -0.77
SF1-218ENST00000489544 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 ZNF526Q8TF50 670 aaPredicted RBP10.25□□□□□ -0.77
SF1-218ENST00000489544 JDP2Q8WYK2 163 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 FAM84BQ96KN1 310 aaPredicted RBP10.25□□□□□ -0.77
SF1-218ENST00000489544 IL1RAPL2Q9NP60 686 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
SF1-218ENST00000489544 JAG2Q9Y219 1238 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 MED23Q9ULK4 1368 aa10.25□□□□□ -0.77
SF1-218ENST00000489544 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 G3V3G9 751 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 FZD9O00144 591 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 DDNO94850 711 aaPredicted RBP10.24□□□□□ -0.77
SF1-218ENST00000489544 SLC5A1P13866 664 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 CXCL9Q07325 125 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 LPIN2Q92539 896 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 MXD3Q9BW11 206 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
SF1-218ENST00000489544 ZNRF3Q9ULT6 936 aa10.24□□□□□ -0.77
SF1-218ENST00000489544 IFIT1P09914 478 aaKnown RBP10.23□□□□□ -0.77
SF1-218ENST00000489544 PHKA1P46020 1223 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 TNNI3KQ59H18 835 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 C15orf52Q6ZUT6 534 aaKnown RBP10.23□□□□□ -0.77
SF1-218ENST00000489544 FBXO33Q7Z6M2 555 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 EAF2Q96CJ1 260 aaPredicted RBP10.23□□□□□ -0.77
SF1-218ENST00000489544 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
SF1-218ENST00000489544 VPS33BQ9H267 617 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 DCTPP1Q9H773 170 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 CD209Q9NNX6 404 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 FPGT-TNNI3KV9GXZ4 949 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 ZNF609O15014 1411 aa10.23□□□□□ -0.77
SF1-218ENST00000489544 TIAM2Q8IVF5 1701 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 PSMD14O00487 310 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 HIBADHP31937 336 aaKnown RBP10.22□□□□□ -0.77
SF1-218ENST00000489544 EIF6P56537 245 aaKnown RBP10.22□□□□□ -0.77
SF1-218ENST00000489544 C1QTNF8P60827 252 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
SF1-218ENST00000489544 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 DBNDD2Q9BQY9 259 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
SF1-218ENST00000489544 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
SF1-218ENST00000489544 SHTN1A0MZ66 631 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 GLTPD2A6NH11 291 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 RAB11FIP3O75154 756 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 GTF2IP78347 998 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 CHAF1AQ13111 956 aaPredicted RBP10.21□□□□□ -0.77
SF1-218ENST00000489544 AAMPQ13685 434 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 CAVIN4Q5BKX8 364 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 CCDC102BQ68D86 513 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 AACSQ86V21 672 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 VPS37DQ86XT2 251 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 KIF1BPQ96EK5 621 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 DBNLQ9UJU6 430 aaKnown RBP10.21□□□□□ -0.77
SF1-218ENST00000489544 AKAP2Q9Y2D5 859 aa10.21□□□□□ -0.77
SF1-218ENST00000489544 DICER1Q9UPY3 1922 aaKnown RBP10.21□□□□□ -0.78
SF1-218ENST00000489544 SCN9AQ15858 1988 aa10.21□□□□□ -0.78
SF1-218ENST00000489544 NEFLP07196 543 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 IL1R1P14778 569 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 SCARF1Q14162 830 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 GRIK5Q16478 980 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 PI16Q6UXB8 463 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 C16orf71Q8IYS4 520 aaPredicted RBP10.2□□□□□ -0.78
SF1-218ENST00000489544 TDRD7Q8NHU6 1098 aaKnown RBP10.2□□□□□ -0.78
SF1-218ENST00000489544 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
SF1-218ENST00000489544 NMRK2Q9NPI5 230 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 GPR108Q9NPR9 543 aa10.2□□□□□ -0.78
SF1-218ENST00000489544 COL1A1P02452 1464 aaPredicted RBP10.19□□□□□ -0.78
SF1-218ENST00000489544 ZC3H4Q9UPT8 1303 aaKnown RBP10.19□□□□□ -0.78
SF1-218ENST00000489544 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
SF1-218ENST00000489544 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
SF1-218ENST00000489544 POTECB2RU33 542 aa10.19□□□□□ -0.78
SF1-218ENST00000489544 FRAT2O75474 233 aaPredicted RBP10.19□□□□□ -0.78
SF1-218ENST00000489544 GMPSP49915 693 aaPredicted RBP10.19□□□□□ -0.78
SF1-218ENST00000489544 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
SF1-218ENST00000489544 DACT2Q5SW24 774 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms