RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PPIP5K1Q6PFW1 1433 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 CCDC152Q4G0S7 254 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 ATRIPQ8WXE1 791 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 PSMA7O14818 248 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 PHACTR2O75167 634 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 A0A1W2PRG0 241 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 TBC1D5Q92609 795 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 CEP63Q96MT8 703 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 SPAG1Q07617 926 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 TFCP2Q12800 502 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 VPS18Q9P253 973 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 BMP15O95972 392 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 HLA-DOAP06340 250 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 CCDC155Q8N6L0 562 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 UBE2Q2Q8WVN8 375 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 RBSNQ9H1K0 784 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
NPHP4-209ENST00000489180 TACC1O75410 805 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 UBXN1Q04323 297 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 TMTC2Q8N394 836 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 DNAI2Q9GZS0 605 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 CAPN2P17655 700 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 PLIN2Q99541 437 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 CABP5Q9NP86 173 aa20.02■□□□□ 0.8
NPHP4-209ENST00000489180 IL15P40933 162 aaPredicted RBP20.02■□□□□ 0.8
NPHP4-209ENST00000489180 TRIM75PA6NK02 468 aa20.02■□□□□ 0.79
NPHP4-209ENST00000489180 F8W031 263 aaPredicted RBP20.02■□□□□ 0.79
NPHP4-209ENST00000489180 NAPAP54920 295 aa20.02■□□□□ 0.79
NPHP4-209ENST00000489180 CCDC174Q6PII3 467 aa20.02■□□□□ 0.79
NPHP4-209ENST00000489180 CCDC94Q9BW85 323 aaPredicted RBP20.02■□□□□ 0.79
NPHP4-209ENST00000489180 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.79
NPHP4-209ENST00000489180 TMEM110-MUSTN1A8MSY1 372 aa20.01■□□□□ 0.79
NPHP4-209ENST00000489180 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
NPHP4-209ENST00000489180 RNF113AO15541 343 aaKnown RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
NPHP4-209ENST00000489180 KRT13P13646 458 aa20.01■□□□□ 0.79
NPHP4-209ENST00000489180 DNAJC21Q5F1R6 531 aaKnown RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 MIGA1Q8NAN2 632 aa20.01■□□□□ 0.79
NPHP4-209ENST00000489180 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 UTP14AQ9BVJ6 771 aaKnown RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 OTUD7AQ8TE49 926 aaPredicted RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 LRRC59Q96AG4 307 aaKnown RBP20.01■□□□□ 0.79
NPHP4-209ENST00000489180 MSH6P52701 1360 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 A0A1B0GVL5 298 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 MCM7P33993 719 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 HSPA4P34932 840 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 POLR3AO14802 1390 aaPredicted RBP20■□□□□ 0.79
NPHP4-209ENST00000489180 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
NPHP4-209ENST00000489180 PICALMQ13492 652 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 NAA16Q6N069 864 aaPredicted RBP20■□□□□ 0.79
NPHP4-209ENST00000489180 ERMNQ8TAM6 284 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 SELENOOQ9BVL4 669 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 IKBKGQ9Y6K9 419 aa20■□□□□ 0.79
NPHP4-209ENST00000489180 GJC1P36383 396 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 NBPF5PQ86XG9 351 aaPredicted RBP19.99■□□□□ 0.79
NPHP4-209ENST00000489180 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 IVLP07476 585 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
NPHP4-209ENST00000489180 FANCAO15360 1455 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 MRVI1Q9Y6F6 885 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 GSTO1P78417 241 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 KIF5AQ12840 1032 aa19.99■□□□□ 0.79
NPHP4-209ENST00000489180 TTLL12Q14166 644 aaPredicted RBP19.99■□□□□ 0.79
NPHP4-209ENST00000489180 DTNBO60941 627 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 PPP1R14CQ8TAE6 165 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 CCDC172P0C7W6 258 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 KRT2P35908 639 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 CCDC42Q96M95 316 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 PSMD1Q99460 953 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 OPA1O60313 960 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 KRT83P78385 493 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 HS1BP3Q53T59 392 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 MICALL1Q8N3F8 863 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 GTF3C6Q969F1 213 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 MAGEB6P1A0A0J9YX57 407 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 SMIM23A6NLE4 172 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 KRT86O43790 486 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 IFT81Q8WYA0 676 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 INTS4Q96HW7 963 aaKnown RBP19.98■□□□□ 0.79
NPHP4-209ENST00000489180 MAGEB6Q8N7X4 407 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 SELENOSQ9BQE4 189 aa19.98■□□□□ 0.79
NPHP4-209ENST00000489180 DHX32Q7L7V1 743 aaKnown RBP19.97■□□□□ 0.79
NPHP4-209ENST00000489180 ZKSCAN3Q9BRR0 538 aa19.97■□□□□ 0.79
NPHP4-209ENST00000489180 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-209ENST00000489180 FBF1Q8TES7 1133 aa19.97■□□□□ 0.79
NPHP4-209ENST00000489180 ACSBG1Q96GR2 724 aa19.97■□□□□ 0.79
NPHP4-209ENST00000489180 BICC1Q9H694 974 aaKnown RBP19.97■□□□□ 0.79
NPHP4-209ENST00000489180 CALM1P0DP23 149 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 CALM2P0DP24 149 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 CALM3P0DP25 149 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 ACTN2P35609 894 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 C17orf53Q8N3J3 647 aaPredicted RBP19.96■□□□□ 0.79
NPHP4-209ENST00000489180 ZNF622Q969S3 477 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms