RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 TFCP2Q12800 502 aa19.72■□□□□ 0.75
HDAC7-224ENST00000488927 ATP2B3Q16720 1220 aa19.72■□□□□ 0.75
HDAC7-224ENST00000488927 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
HDAC7-224ENST00000488927 A0A1B0GUL6 1792 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 WTIPA6NIX2 430 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-224ENST00000488927 SNAP23O00161 211 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 ECE2O60344 883 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 CAVIN4Q5BKX8 364 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 DBNDD1Q9H9R9 158 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 GPR108Q9NPR9 543 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 IRS2Q9Y4H2 1338 aa19.71■□□□□ 0.75
HDAC7-224ENST00000488927 SASH1O94885 1247 aa19.7■□□□□ 0.74
HDAC7-224ENST00000488927 TNIP1Q15025 636 aa19.7■□□□□ 0.74
HDAC7-224ENST00000488927 DOK7Q18PE1 504 aa19.7■□□□□ 0.74
HDAC7-224ENST00000488927 EXOC6BQ9Y2D4 811 aa19.7■□□□□ 0.74
HDAC7-224ENST00000488927 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
HDAC7-224ENST00000488927 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 COL4A5P29400 1685 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 GLTPD2A6NH11 291 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 KLRK1P26718 216 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 HIBADHP31937 336 aaKnown RBP19.69■□□□□ 0.74
HDAC7-224ENST00000488927 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
HDAC7-224ENST00000488927 TXNRD3Q86VQ6 643 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 VPS37DQ86XT2 251 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 KIF1BPQ96EK5 621 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 KDM2BQ8NHM5 1336 aa19.69■□□□□ 0.74
HDAC7-224ENST00000488927 HDAC1Q13547 482 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-224ENST00000488927 GPC2Q8N158 579 aa19.68■□□□□ 0.74
HDAC7-224ENST00000488927 FAM84BQ96KN1 310 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-224ENST00000488927 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
HDAC7-224ENST00000488927 CD209Q9NNX6 404 aa19.68■□□□□ 0.74
HDAC7-224ENST00000488927 A0A1B0GUL7 405 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 YDJCA8MPS7 323 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 NEFLP07196 543 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 IL1R1P14778 569 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 CIAPIN1Q6FI81 312 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 RHPN1Q8TCX5 695 aa19.67■□□□□ 0.74
HDAC7-224ENST00000488927 RWDD1Q9H446 243 aaPredicted RBP19.67■□□□□ 0.74
HDAC7-224ENST00000488927 GYG1P46976 350 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 CXCL9Q07325 125 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 FBXO33Q7Z6M2 555 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 GNL3LQ9NVN8 582 aaKnown RBP19.66■□□□□ 0.74
HDAC7-224ENST00000488927 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 ZNF541Q9H0D2 1346 aa19.66■□□□□ 0.74
HDAC7-224ENST00000488927 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 TIMM10P62072 90 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 CLASRPQ8N2M8 674 aaKnown RBP19.65■□□□□ 0.74
HDAC7-224ENST00000488927 NEUROD6Q96NK8 337 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 ZNF609O15014 1411 aa19.65■□□□□ 0.74
HDAC7-224ENST00000488927 ZBTB22O15209 634 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 RAD17O75943 681 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 STRIP1Q5VSL9 837 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 TDRD7Q8NHU6 1098 aaKnown RBP19.64■□□□□ 0.73
HDAC7-224ENST00000488927 GCC1Q96CN9 775 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 XAGE2Q96GT9 111 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 LRRCC1Q9C099 1032 aa19.64■□□□□ 0.73
HDAC7-224ENST00000488927 FRAT2O75474 233 aaPredicted RBP19.63■□□□□ 0.73
HDAC7-224ENST00000488927 DDNO94850 711 aaPredicted RBP19.63■□□□□ 0.73
HDAC7-224ENST00000488927 VIL1P09327 827 aaKnown RBP19.63■□□□□ 0.73
HDAC7-224ENST00000488927 RPS12P25398 132 aaKnown RBP19.63■□□□□ 0.73
HDAC7-224ENST00000488927 BCAMP50895 628 aa19.63■□□□□ 0.73
HDAC7-224ENST00000488927 L3MBTL3Q96JM7 780 aaPredicted RBP19.63■□□□□ 0.73
HDAC7-224ENST00000488927 GJA3Q9Y6H8 435 aa19.63■□□□□ 0.73
HDAC7-224ENST00000488927 MYO3BQ8WXR4 1341 aa19.62■□□□□ 0.73
HDAC7-224ENST00000488927 APBB1O00213 710 aa19.62■□□□□ 0.73
HDAC7-224ENST00000488927 PSMD14O00487 310 aa19.62■□□□□ 0.73
HDAC7-224ENST00000488927 SEMA3EO15041 775 aa19.62■□□□□ 0.73
HDAC7-224ENST00000488927 TTLL5Q6EMB2 1281 aa19.62■□□□□ 0.73
HDAC7-224ENST00000488927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
HDAC7-224ENST00000488927 IQCA1LA6NCM1 817 aa19.61■□□□□ 0.73
HDAC7-224ENST00000488927 CCDC158Q5M9N0 1113 aa19.61■□□□□ 0.73
HDAC7-224ENST00000488927 CCDC102BQ68D86 513 aa19.61■□□□□ 0.73
HDAC7-224ENST00000488927 AGBL3Q8NEM8 1001 aa19.61■□□□□ 0.73
HDAC7-224ENST00000488927 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
HDAC7-224ENST00000488927 KCNQ5Q9NR82 932 aa19.61■□□□□ 0.73
HDAC7-224ENST00000488927 FAM205AQ6ZU69 1335 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-224ENST00000488927 ADORA1P30542 326 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 FKBP1AP62942 108 aaKnown RBP19.6■□□□□ 0.73
HDAC7-224ENST00000488927 GTF2IP78347 998 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 RSBN1LQ6PCB5 846 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-224ENST00000488927 AACSQ86V21 672 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 DPF2Q92785 391 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 FBXW7Q969H0 707 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-224ENST00000488927 IL1RAPL2Q9NP60 686 aa19.6■□□□□ 0.73
HDAC7-224ENST00000488927 ZBTB47Q9UFB7 747 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-224ENST00000488927 ARAP2Q8WZ64 1704 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 IFIT2P09913 472 aaKnown RBP19.59■□□□□ 0.73
HDAC7-224ENST00000488927 UQCRFS1P1P0C7P4 283 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 PHKA1P46020 1223 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 MMP14P50281 582 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 DACT2Q5SW24 774 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 ZNF784Q8NCA9 323 aaPredicted RBP19.59■□□□□ 0.73
HDAC7-224ENST00000488927 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
HDAC7-224ENST00000488927 TBC1D22AQ8WUA7 517 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms