RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 LRP10Q7Z4F1 713 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 NEURL1BA8MQ27 555 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 STK3Q13188 491 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
RER1-207ENST00000488353 CCDC69A6NI79 296 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 HNRNPH2P55795 449 aaKnown RBP16.61■□□□□ 0.25
RER1-207ENST00000488353 IQCB1Q15051 598 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
RER1-207ENST00000488353 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
RER1-207ENST00000488353 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 CCZ1BP86790 482 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 CCZ1P86791 482 aaPredicted RBP16.61■□□□□ 0.25
RER1-207ENST00000488353 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
RER1-207ENST00000488353 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
RER1-207ENST00000488353 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
RER1-207ENST00000488353 L2HGDHQ9H9P8 463 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 HIP1O00291 1037 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
RER1-207ENST00000488353 IL2RBP14784 551 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 EVA1CP58658 441 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 GCKRQ14397 625 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 FHOD1Q9Y613 1164 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 UTYO14607 1347 aa16.6■□□□□ 0.25
RER1-207ENST00000488353 PSMA5P28066 241 aa16.59■□□□□ 0.25
RER1-207ENST00000488353 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
RER1-207ENST00000488353 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.59■□□□□ 0.25
RER1-207ENST00000488353 NPHP1O15259 732 aa16.59■□□□□ 0.25
RER1-207ENST00000488353 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
RER1-207ENST00000488353 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
RER1-207ENST00000488353 GSDMDP57764 484 aa16.58■□□□□ 0.25
RER1-207ENST00000488353 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.25
RER1-207ENST00000488353 PGBD1Q96JS3 809 aa16.58■□□□□ 0.25
RER1-207ENST00000488353 BECN2A8MW95 431 aa16.58■□□□□ 0.24
RER1-207ENST00000488353 CHGBP05060 677 aa16.58■□□□□ 0.24
RER1-207ENST00000488353 CLCN6P51797 869 aa16.58■□□□□ 0.24
RER1-207ENST00000488353 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
RER1-207ENST00000488353 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
RER1-207ENST00000488353 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
RER1-207ENST00000488353 CTAGE5O15320 804 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 PNMA6AP0CW24 399 aaPredicted RBP16.57■□□□□ 0.24
RER1-207ENST00000488353 SNW1Q13573 536 aaKnown RBP16.57■□□□□ 0.24
RER1-207ENST00000488353 STX1AQ16623 288 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 PLEKHG2Q9H7P9 1386 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 TUBB4AP04350 444 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 TOB2Q14106 344 aaPredicted RBP16.57■□□□□ 0.24
RER1-207ENST00000488353 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
RER1-207ENST00000488353 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
RER1-207ENST00000488353 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
RER1-207ENST00000488353 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
RER1-207ENST00000488353 TPM4P67936 248 aa16.56■□□□□ 0.24
RER1-207ENST00000488353 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
RER1-207ENST00000488353 GLI3P10071 1580 aa16.56■□□□□ 0.24
RER1-207ENST00000488353 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
RER1-207ENST00000488353 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
RER1-207ENST00000488353 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
RER1-207ENST00000488353 A1BGP04217 495 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 RAD51AP2Q09MP3 1159 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 TFCP2Q12800 502 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 TXLNBQ8N3L3 684 aa16.55■□□□□ 0.24
RER1-207ENST00000488353 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 TAF5LO75529 589 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
RER1-207ENST00000488353 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
RER1-207ENST00000488353 IMPACTQ9P2X3 320 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 CFAP45Q9UL16 551 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 MED23Q9ULK4 1368 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 A0A087WZG4 1122 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.243e-7■■■■□ 21
RER1-207ENST00000488353 TMCO3Q6UWJ1 677 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
RER1-207ENST00000488353 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
RER1-207ENST00000488353 DBNLQ9UJU6 430 aaKnown RBP16.54■□□□□ 0.24
RER1-207ENST00000488353 JAK2O60674 1132 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 MUM1L1Q5H9M0 696 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.53■□□□□ 0.246e-6■□□□□ 9.8
RER1-207ENST00000488353 PSDA5PKW4 1024 aaPredicted RBP16.53■□□□□ 0.24
RER1-207ENST00000488353 SYT10Q6XYQ8 523 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 ALDH8A1Q9H2A2 487 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms