RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 MRPL50Q8N5N7 158 aaKnown RBP14.25□□□□□ -0.13
RAB11FIP3-210ENST00000487899 KAZALD1Q96I82 304 aa14.25□□□□□ -0.13
RAB11FIP3-210ENST00000487899 WBP1LQ9NX94 342 aa14.25□□□□□ -0.13
RAB11FIP3-210ENST00000487899 UTYO14607 1347 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ANKRD18BA2A2Z9 1011 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 USP17L3A6NCW0 530 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 USP17L4A6NCW7 530 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 E9PSI1 815 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 USP17L1Q7RTZ2 530 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ZNF408Q9H9D4 720 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
RAB11FIP3-210ENST00000487899 G3V3G9 751 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SNAP23O00161 211 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 LMBR1LQ6UX01 489 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 CDCA7LQ96GN5 454 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ANKRD2Q9GZV1 360 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 COA1Q9GZY4 146 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 CASP8AP2Q9UKL3 1982 aa14.23□□□□□ -0.13
RAB11FIP3-210ENST00000487899 PTPRCP08575 1304 aa14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ECE1P42892 770 aa14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 IFIT5Q13325 482 aaKnown RBP14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 RBM26Q5T8P6 1007 aaKnown RBP14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 MYOZ2Q9NPC6 264 aa14.22□□□□□ -0.13
RAB11FIP3-210ENST00000487899 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 PITPNM2Q9BZ72 1349 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 AOC2O75106 756 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 TAF5LO75529 589 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 USP17L8P0C7I0 530 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 STRIP1Q5VSL9 837 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 ANGEL2Q5VTE6 544 aaKnown RBP14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.13
RAB11FIP3-210ENST00000487899 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CTCFP49711 727 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 GRM1Q13255 1194 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SCARF1Q14162 830 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 C15orf52Q6ZUT6 534 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 HELBQ8NG08 1087 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 AIDAQ96BJ3 306 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 DCPSQ96C86 337 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CDCA5Q96FF9 252 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 PRDM10Q9NQV6 1147 aa14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-210ENST00000487899 COL1A1P02452 1464 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SSC5DA1L4H1 1573 aa14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 HUNKP57058 714 aa14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 ANKRD44Q8N8A2 993 aa14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 BICC1Q9H694 974 aaKnown RBP14.19□□□□□ -0.14
RAB11FIP3-210ENST00000487899 FAM155AB1AL88 458 aaPredicted RBP14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SASH1O94885 1247 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 KCNJ4P48050 445 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 LBX1P52954 281 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CCDC57Q2TAC2 916 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 NBPF9Q3BBW0 867 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 ALDH1L2Q3SY69 923 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SULF1Q8IWU6 871 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CERS5Q8N5B7 392 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 GBA2Q9HCG7 927 aaPredicted RBP14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-210ENST00000487899 WNT10BO00744 389 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 IL1R1P14778 569 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 MAP2K2P36507 400 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 GTF2IP78347 998 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 LDHAL6AQ6ZMR3 332 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 ZBED3Q96IU2 234 aaPredicted RBP14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 ZIC5Q96T25 663 aa14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
RAB11FIP3-210ENST00000487899 HTTP42858 3142 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 BRPF1P55201 1214 aaPredicted RBP14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 TTLL5Q6EMB2 1281 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 KIAA0825Q8IV33 1275 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 CNNM1Q9NRU3 951 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
RAB11FIP3-210ENST00000487899 RGMBQ6NW40 437 aa14.15□□□□□ -0.14
RAB11FIP3-210ENST00000487899 ZNF804AQ7Z570 1209 aa14.15□□□□□ -0.14
RAB11FIP3-210ENST00000487899 VGLL2Q8N8G2 317 aa14.15□□□□□ -0.14
RAB11FIP3-210ENST00000487899 USP44Q9H0E7 712 aa14.15□□□□□ -0.14
RAB11FIP3-210ENST00000487899 AOX1Q06278 1338 aa14.15□□□□□ -0.15
RAB11FIP3-210ENST00000487899 SLC10A3P09131 477 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms