RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 MPNDQ8N594 471 aa20.68■□□□□ 0.9
NF1-211ENST00000487476 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
NF1-211ENST00000487476 GGA1Q9UJY5 639 aa20.68■□□□□ 0.9
NF1-211ENST00000487476 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
NF1-211ENST00000487476 DPP8Q6V1X1 898 aaPredicted RBP20.67■□□□□ 0.9
NF1-211ENST00000487476 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
NF1-211ENST00000487476 LEMD3Q9Y2U8 911 aa20.67■□□□□ 0.9
NF1-211ENST00000487476 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
NF1-211ENST00000487476 C6orf229H3BNL8 230 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 IFIT1P09914 478 aaKnown RBP20.66■□□□□ 0.9
NF1-211ENST00000487476 GYG1P46976 350 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 BCAMP50895 628 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
NF1-211ENST00000487476 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 PHKA1P46020 1223 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 GORABQ5T7V8 394 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 PI4K2BQ8TCG2 481 aa20.66■□□□□ 0.9
NF1-211ENST00000487476 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
NF1-211ENST00000487476 ATP2B4P23634 1241 aa20.65■□□□□ 0.9
NF1-211ENST00000487476 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
NF1-211ENST00000487476 FAM84BQ96KN1 310 aaPredicted RBP20.65■□□□□ 0.9
NF1-211ENST00000487476 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
NF1-211ENST00000487476 SNED1Q8TER0 1413 aa20.64■□□□□ 0.9
NF1-211ENST00000487476 CCDC102BQ68D86 513 aa20.64■□□□□ 0.89
NF1-211ENST00000487476 OSBPL3Q9H4L5 887 aa20.64■□□□□ 0.89
NF1-211ENST00000487476 DUOX1Q9NRD9 1551 aa20.63■□□□□ 0.89
NF1-211ENST00000487476 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
NF1-211ENST00000487476 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
NF1-211ENST00000487476 SCARF1Q14162 830 aa20.63■□□□□ 0.89
NF1-211ENST00000487476 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
NF1-211ENST00000487476 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
NF1-211ENST00000487476 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
NF1-211ENST00000487476 RIMBP2O15034 1052 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 CCDC93Q567U6 631 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 IQSEC3Q9UPP2 1182 aaPredicted RBP20.62■□□□□ 0.89
NF1-211ENST00000487476 TTC41PQ6P2S7 1318 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 CCDC158Q5M9N0 1113 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 TTC39AQ5SRH9 613 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
NF1-211ENST00000487476 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
NF1-211ENST00000487476 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
NF1-211ENST00000487476 ATP5JP18859 108 aa20.61■□□□□ 0.89
NF1-211ENST00000487476 TTC22Q5TAA0 569 aa20.61■□□□□ 0.89
NF1-211ENST00000487476 RTFDC1Q9BY42 306 aaPredicted RBP20.61■□□□□ 0.89
NF1-211ENST00000487476 CAVIN4Q5BKX8 364 aa20.6■□□□□ 0.89
NF1-211ENST00000487476 EDC3Q96F86 508 aaKnown RBP20.6■□□□□ 0.89
NF1-211ENST00000487476 SNRKQ9NRH2 765 aa20.6■□□□□ 0.89
NF1-211ENST00000487476 VPS37DQ86XT2 251 aa20.6■□□□□ 0.89
NF1-211ENST00000487476 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
NF1-211ENST00000487476 GLRX3O76003 335 aaKnown RBP20.59■□□□□ 0.89
NF1-211ENST00000487476 HIBADHP31937 336 aaKnown RBP20.59■□□□□ 0.89
NF1-211ENST00000487476 MCAMP43121 646 aa20.59■□□□□ 0.89
NF1-211ENST00000487476 WASHC4Q2M389 1173 aa20.59■□□□□ 0.89
NF1-211ENST00000487476 C15orf52Q6ZUT6 534 aaKnown RBP20.59■□□□□ 0.89
NF1-211ENST00000487476 AOX1Q06278 1338 aa20.59■□□□□ 0.89
NF1-211ENST00000487476 ERC2O15083 957 aa20.58■□□□□ 0.89
NF1-211ENST00000487476 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.88
NF1-211ENST00000487476 RASGRF1Q13972 1273 aa20.58■□□□□ 0.88
NF1-211ENST00000487476 ZC3H12CQ9C0D7 883 aaKnown RBP20.58■□□□□ 0.88
NF1-211ENST00000487476 ZNF277Q9NRM2 450 aaPredicted RBP20.58■□□□□ 0.88
NF1-211ENST00000487476 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
NF1-211ENST00000487476 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
NF1-211ENST00000487476 AOC3Q16853 763 aa20.57■□□□□ 0.88
NF1-211ENST00000487476 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
NF1-211ENST00000487476 SOGA3Q5TF21 947 aa20.57■□□□□ 0.88
NF1-211ENST00000487476 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
NF1-211ENST00000487476 NFKBIEO00221 500 aa20.57■□□□□ 0.88
NF1-211ENST00000487476 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
NF1-211ENST00000487476 YBX3P16989 372 aaKnown RBP eCLIP20.56■□□□□ 0.884e-10■■■□□ 18.5
NF1-211ENST00000487476 ANP32AP39687 249 aaKnown RBP20.56■□□□□ 0.88
NF1-211ENST00000487476 PSMD1Q99460 953 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 HAUS7Q99871 368 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 HMG20BQ9P0W2 317 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 SDSP20132 328 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 ZAP70P43403 619 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
NF1-211ENST00000487476 EYA3Q99504 573 aa20.56■□□□□ 0.88
NF1-211ENST00000487476 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 GRIPAP1Q4V328 841 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 CD209Q9NNX6 404 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 RASSF7Q02833 373 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 DBNDD1Q9H9R9 158 aa20.55■□□□□ 0.88
NF1-211ENST00000487476 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
NF1-211ENST00000487476 GOLIM4O00461 696 aa20.54■□□□□ 0.88
NF1-211ENST00000487476 SPATA5Q8NB90 893 aa20.54■□□□□ 0.88
NF1-211ENST00000487476 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
NF1-211ENST00000487476 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
NF1-211ENST00000487476 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 SUPT20HQ8NEM7 779 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
NF1-211ENST00000487476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
NF1-211ENST00000487476 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms