RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TXNRD3Q86VQ6 643 aa23.93■■□□□ 1.42
PCOLCE-208ENST00000487172 SLC5A1P13866 664 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 ATP2B3Q16720 1220 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 RHPN1Q8TCX5 695 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 KIF1BPQ96EK5 621 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 RWDD1Q9H446 243 aaPredicted RBP23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 COL4A5P29400 1685 aa23.92■■□□□ 1.42
PCOLCE-208ENST00000487172 FZD9O00144 591 aa23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 KLRK1P26718 216 aa23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 PODNQ7Z5L7 613 aa23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 COA1Q9GZY4 146 aa23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 ZNRF3Q9ULT6 936 aa23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 GOLGB1Q14789 3259 aaKnown RBP23.91■■□□□ 1.42
PCOLCE-208ENST00000487172 A0A1B0GUL7 405 aa23.9■■□□□ 1.42
PCOLCE-208ENST00000487172 FAM84BQ96KN1 310 aaPredicted RBP23.9■■□□□ 1.42
PCOLCE-208ENST00000487172 TIMM10P62072 90 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 DOK7Q18PE1 504 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 TNNI3KQ59H18 835 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 FBXO33Q7Z6M2 555 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 GCC1Q96CN9 775 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 FPGT-TNNI3KV9GXZ4 949 aa23.89■■□□□ 1.41
PCOLCE-208ENST00000487172 TIAM2Q8IVF5 1701 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 G3V3G9 751 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 ECE2O60344 883 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 HIBADHP31937 336 aaKnown RBP23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 CAVIN4Q5BKX8 364 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 DCAF8Q5TAQ9 597 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 ZNF804AQ7Z570 1209 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 DBNDD1Q9H9R9 158 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 CD209Q9NNX6 404 aa23.88■■□□□ 1.41
PCOLCE-208ENST00000487172 ZNF609O15014 1411 aa23.87■■□□□ 1.41
PCOLCE-208ENST00000487172 ZBTB22O15209 634 aa23.87■■□□□ 1.41
PCOLCE-208ENST00000487172 LRRCC1Q9C099 1032 aa23.87■■□□□ 1.41
PCOLCE-208ENST00000487172 ARAP2Q8WZ64 1704 aa23.87■■□□□ 1.41
PCOLCE-208ENST00000487172 YDJCA8MPS7 323 aa23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 IGHDP01880 384 aa23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 IL1R1P14778 569 aa23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 GYG1P46976 350 aa23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 EIF6P56537 245 aaKnown RBP23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 ERICH6BQ5W0A0 696 aa23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 EAF2Q96CJ1 260 aaPredicted RBP23.86■■□□□ 1.41
PCOLCE-208ENST00000487172 SMC5Q8IY18 1101 aa23.85■■□□□ 1.41
PCOLCE-208ENST00000487172 CLASRPQ8N2M8 674 aaKnown RBP23.85■■□□□ 1.41
PCOLCE-208ENST00000487172 XAGE2Q96GT9 111 aa23.85■■□□□ 1.41
PCOLCE-208ENST00000487172 NEUROD6Q96NK8 337 aa23.85■■□□□ 1.41
PCOLCE-208ENST00000487172 BCAMP50895 628 aa23.84■■□□□ 1.41
PCOLCE-208ENST00000487172 TDRD7Q8NHU6 1098 aaKnown RBP23.84■■□□□ 1.41
PCOLCE-208ENST00000487172 IL1RAPL2Q9NP60 686 aa23.84■■□□□ 1.41
PCOLCE-208ENST00000487172 UTRNP46939 3433 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 APBB1O00213 710 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 ADORA1P30542 326 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 CXCL9Q07325 125 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 DPY19L2Q6NUT2 758 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 VPS37DQ86XT2 251 aa23.83■■□□□ 1.41
PCOLCE-208ENST00000487172 CIAPIN1Q6FI81 312 aa23.82■■□□□ 1.4
PCOLCE-208ENST00000487172 PSME4Q14997 1843 aa23.82■■□□□ 1.4
PCOLCE-208ENST00000487172 SCN9AQ15858 1988 aa23.82■■□□□ 1.4
PCOLCE-208ENST00000487172 GLTPD2A6NH11 291 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 TNIP1Q15025 636 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 CCDC102BQ68D86 513 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 AACSQ86V21 672 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 KCNQ5Q9NR82 932 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 GNL3LQ9NVN8 582 aaKnown RBP23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 ZNF541Q9H0D2 1346 aa23.81■■□□□ 1.4
PCOLCE-208ENST00000487172 PHKA1P46020 1223 aa23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 STRIP1Q5VSL9 837 aa23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 GPC2Q8N158 579 aa23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 DBNDD2Q9BQY9 259 aa23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 CCDC8Q9H0W5 538 aaPredicted RBP23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 DBNLQ9UJU6 430 aaKnown RBP23.8■■□□□ 1.4
PCOLCE-208ENST00000487172 USP17L3A6NCW0 530 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 USP17L4A6NCW7 530 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 SEMA3EO15041 775 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 RAD17O75943 681 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 VIL1P09327 827 aaKnown RBP23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 CCDC158Q5M9N0 1113 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 GORABQ5T7V8 394 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 USP17L1Q7RTZ2 530 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
PCOLCE-208ENST00000487172 SMARCA5O60264 1052 aaPredicted RBP23.78■■□□□ 1.4
PCOLCE-208ENST00000487172 ANKRD45Q5TZF3 282 aa23.78■■□□□ 1.4
PCOLCE-208ENST00000487172 TTLL5Q6EMB2 1281 aa23.78■■□□□ 1.4
PCOLCE-208ENST00000487172 ZNF512BQ96KM6 892 aaPredicted RBP23.78■■□□□ 1.4
PCOLCE-208ENST00000487172 PSMD14O00487 310 aa23.77■■□□□ 1.4
PCOLCE-208ENST00000487172 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
PCOLCE-208ENST00000487172 GTF2IP78347 998 aa23.77■■□□□ 1.4
PCOLCE-208ENST00000487172 ZNF646O15015 1829 aaPredicted RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 UQCRFS1P1P0C7P4 283 aa23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 ARID4AP29374 1257 aaPredicted RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 FKBP1AP62942 108 aaKnown RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 DACT2Q5SW24 774 aa23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 TLR7Q9NYK1 1049 aaKnown RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 DENND2AQ9ULE3 1009 aa23.76■■□□□ 1.39
PCOLCE-208ENST00000487172 FRAT2O75474 233 aaPredicted RBP23.75■■□□□ 1.39
PCOLCE-208ENST00000487172 RSBN1LQ6PCB5 846 aaPredicted RBP23.75■■□□□ 1.39
PCOLCE-208ENST00000487172 IQSEC3Q9UPP2 1182 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms